Gene Plav_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2865 
Symbol 
ID5454084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3070057 
End bp3070677 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID640878447 
Producthypothetical protein 
Protein accessionYP_001414129 
Protein GI154253305 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.414585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0571664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTTTT ATCCGAACGA ACGCATTGCT CTCTTCATCG ATGGCGCCAA TCTCTACTCC 
GCCGCCCGGG GCCTCGGCTT CGATATCGAT TACAAGCGCC TTCTGGATCA CTTTCGCTCG
AAAGGCGTCC TCGTCCGGGC TTTCTACTAC ACAGCCCTCC TTGAGGATCA GGAATATTCT
CCCCTTCGCC CGTTGATCGA CTGGCTCGAT TACAATGGCT ATGCGGTTGT TACCAAGCCC
GCCAAGGAAT TCACCGACGC CACCGGCCGC CGCCGAATCA AAGGCAACAT GGATATCGAA
CTGGCGATCG ATGCGCTCGA AATAGCGGAC AAGCTCGACC ACCTCGTCCT CTTCTCCGGT
GACGGCGACT TCCGGCGCCT GGTTGATGCC GTCCAGCGCA AGGGCAAGCG CGTCACGGTC
GTCTCGACGA TGCGCAGCCA GCCTCCCATG ATCGCGGACG AGCTTCGCCG CCAGGCGGAT
CAATACGTCG AACTTGAATC CATGCGCGAT GCCATCGGCC GCAGCCACTC CGACCGTCCG
GCCGCACCGC TCCGCAACGA TGATGATTTC GAGTATGACG ACGAAGAAGA CGACGAGATC
GAACGCCCGG CGCGCGCCTG A
 
Protein sequence
MIFYPNERIA LFIDGANLYS AARGLGFDID YKRLLDHFRS KGVLVRAFYY TALLEDQEYS 
PLRPLIDWLD YNGYAVVTKP AKEFTDATGR RRIKGNMDIE LAIDALEIAD KLDHLVLFSG
DGDFRRLVDA VQRKGKRVTV VSTMRSQPPM IADELRRQAD QYVELESMRD AIGRSHSDRP
AAPLRNDDDF EYDDEEDDEI ERPARA