| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2860 |
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| Symbol | |
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| ID | 5453941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3064441 |
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| End bp | 3065313 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878442 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001414124 |
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| Protein GI | 154253300 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.390288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTC CCTATCGCGA GCTATTCTAT ACCAGTCAGG ACGGCCTCCG GCTTTTCGCC
CGGGACTATG GCGACCGAAC CTCTCCCGGT ACGCCGGTTA TTTGCCTGCC GGGCCTGACC
CGAAATTCAA AGGACTTCGA AGCGCTGGCG GTTCACCTCT CATCCCGCCA CCGTGTCCTC
TGCCCGGACC TGCGCGGCAG GGGGCTTTCG GAATATTGTC AGAACTGGTC CGACTACACG
CCGGCCCACG AGATGATGGA CACTCTCGAC CTCATGGCCG CAGCCGGCGT TGCGCAAGCG
ATCTTTGTGG GCACGTCGCG CGGCGGCCTC ATCATCATGG CGCTTGCCGC CTTTCGCCCG
AATGTCATCA AGGCCGCGAT CCTGAACGAT GTTGGTCCGG AGCTCGACCC AAAAGGCATT
GAGCGGATCG CCGGCTATGT CGGCATCATG GAGACACCCG CCACCTGGGA CGAAGCGGCG
GTCAAGCTTC GCATGATGAA TGAGCGCGAA TTTCCAAATC TGTCGAGCGA CGACTGGCGT
GCTTTCTCCC GCCGCACATT TGCCGAGGAA AGCGGCGCAC CAAAGATGGA CTACGACCCG
AAGATAGGGA CCGCCATGCG AAAGGGCATG GACGCCGCGA AGGGCGAAAT TCCAACCCTG
TGGCCGCAAT TCAAGGCACT CGCCCAGATG CCTGTGCTGG TTGTTCGAGG TGAATACTCA
GACCTTCTGA CGGCAGAAAT CGTGGCGCGA ATGACCGAAG AGCATCCCCT GATGAAAACC
ATCGTCGCGA AGGATCGCGG TCACGCACCA TTCCTCGATG AGCCGGAAGT ACTCGCCGCC
ATCGACGCGT TTCTGCAGAA CGACATCACC TGA
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| Protein sequence | MALPYRELFY TSQDGLRLFA RDYGDRTSPG TPVICLPGLT RNSKDFEALA VHLSSRHRVL
CPDLRGRGLS EYCQNWSDYT PAHEMMDTLD LMAAAGVAQA IFVGTSRGGL IIMALAAFRP
NVIKAAILND VGPELDPKGI ERIAGYVGIM ETPATWDEAA VKLRMMNERE FPNLSSDDWR
AFSRRTFAEE SGAPKMDYDP KIGTAMRKGM DAAKGEIPTL WPQFKALAQM PVLVVRGEYS
DLLTAEIVAR MTEEHPLMKT IVAKDRGHAP FLDEPEVLAA IDAFLQNDIT
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