| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2855 |
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| Symbol | |
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| ID | 5455070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3058659 |
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| End bp | 3059783 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640878437 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001414119 |
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| Protein GI | 154253295 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.154936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCGACC CCCAAATTTC GCTCTTCTAT GAAATTCTTG GTTGGATGCC CGCATGGAGC
GCCACGATAC TTCTGGTGGC TATGGGGGCG ATCTTCGCCA TTGTCGCACA CGCGATCGCG
ATCAGAGTGT TCACAACGCT GTTTTCGCAG CGTGCGATTT ATGTGCAAAC ATTGGTGCGC
AGAACCCGGC TTCTAACCTG CGCGATTGCG GTTTTTATTG CAGCGTCCCT CGCCATTCAG
ATGGCCCCGC TTTCGGATGA AAGCCTTTCC GTTATCTCCT CCATTCTGGG TGCCTGCCTT
ATCGTAATTA TCGGCTGGTC CGTGCTGGTG GCGACCCATA TCGCTGCCGA CATTTACATG
GCTCGCTTCG AGCTGGACGT TGCGGACAAT CTTCTCGCCC GAAAACATGT GACGCAGCTA
CGCATCCTTC GCCGTGTAGC GGACACGCTT GTCGTCTTGC TGACGCTGGG CGCGGGGCTG
ATGTCGTTTG AGTCCGTGCG CCAGTATGGG ATCAGTGTTT TTGCCTCGGC AGGTGCTGCG
GGCCTTGTGC TGGGATTTGC TGCGCGCCCC GTGCTGGAAA ACCTCATTGC GGGCATACAG
ATCGCCATAA CACAGCCCAT CCGAATCGAC GATGCGGTGG TGGTCGAAGG GGAGTGGGGG
TGGATCGAGG AAATAAACGG CACCTATGTT GTGATCCGCA TTTGGGACTG GAGGCGGCTG
ATTGTGCCGC TGTCCTATTT CATCCAGAAC CCGTTCACCA ACTGGACCAG AGAGAGCGCA
TCGATCATAG GGACCGTCTA TCTTTATACG GATTATAACC TTCCAGTCGA CGAGCTAAGG
GAGCATCTGA ACGAAGTGGC AAAGTCGTCC CCTCTATGGG ATGGCAAGGT AGTCAACCTC
CAGGTGACGG ATGCCGGTGA CCGTTCCATC GAAATTCGCG CACTGGTGAG TGCGGCCACT
TCACCGCAAG CCTGGGATCT GCGCTGCTAT GTACGAGAGA AACTTGTTTC ATATTTGCGA
GAGCGTCATC CGGATTCTCT ACCGCAAGTG CGGTCGCGAT ATCTCGATGA AGAAAACCTC
AACGGGAAGC GCAGGGTAGA TGGCGTCGTT GCAGATGAAG CATGA
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| Protein sequence | MSDPQISLFY EILGWMPAWS ATILLVAMGA IFAIVAHAIA IRVFTTLFSQ RAIYVQTLVR
RTRLLTCAIA VFIAASLAIQ MAPLSDESLS VISSILGACL IVIIGWSVLV ATHIAADIYM
ARFELDVADN LLARKHVTQL RILRRVADTL VVLLTLGAGL MSFESVRQYG ISVFASAGAA
GLVLGFAARP VLENLIAGIQ IAITQPIRID DAVVVEGEWG WIEEINGTYV VIRIWDWRRL
IVPLSYFIQN PFTNWTRESA SIIGTVYLYT DYNLPVDELR EHLNEVAKSS PLWDGKVVNL
QVTDAGDRSI EIRALVSAAT SPQAWDLRCY VREKLVSYLR ERHPDSLPQV RSRYLDEENL
NGKRRVDGVV ADEA
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