| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2836 |
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| Symbol | |
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| ID | 5455931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3040571 |
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| End bp | 3041635 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878417 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_001414100 |
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| Protein GI | 154253276 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.917959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTA ACACCCGCCC TCCGGCCCGG CCAATTCCAC CTTGCCGCAC TCCGGAATCG
GCCCTATACA ATGCGGCTTT AATGACCAGC GCTGAAAAAC AGCTCCAGCC CCTCTTCCCG
CACCGGCATC TGCTGGGAAT AGAGGGCCTT TCCCCCACCG ACATCACAAG CCTTCTCGAC
CTCGCCGACA CCTATGTCGA GCAGAACCGC CAGGTCGACA AGAAGGGCTC CGTCCTTCGC
GGCCGCACCC AGATCAATCT CTTCTTCGAG GCCTCCACCC GCACCCAAAG CTCCTTCGAG
CTGGCGGGCA AGCGCCTCGG CGCCGACGTC ATGAACATGT CCGTCTCCTC CTCCTCCGTG
AAAAAGGGCG AGACGCTGAT CGACACGGCG GTGACGCTGA ACGCGATGCA CCCCGACCTC
ATCATCATTC GTCACCAGAA CTCCGGCGCC GTCGAACTTC TCGCGCAGAA GGTCTCCTGC
TCGGTCATCA ATGCGGGCGA TGGCGCGCAT GAGCATCCGA CCCAGGCATT GCTCGATGCG
CTCACCATCC GCCGCCGCAA GGGCCGCCTG CAGGGCCTCA TCGTCGCCAT CTGCGGTGAC
ATCCTCCACA GCCGCGTCGC CCGCTCCAAC ATCCTGCTGC TGAACGCCAT GGGCGCGCGC
GTCCGCGTCG TCGCACCGCC GACGCTCCTG CCCGCCGGCA TCGAACGTCT CGGCGTCGAG
GTCTTCCACG ACATGGCCAA GGGCCTCGAA GGCGTCGACA TCGTCATGAT GCTCCGCCTT
CAGCTTGAGC GCATGGCCGG CTCCTACGTG CCGAGCCAGC GCGAATATTT CCATTTCTAC
GGCCTCGACT ACGCCAAGCT CGCCCACGCC AAGCCGGATG CACTCGTCAT GCATCCGGGC
CCGATGAACC GCGGCGTCGA GATCGACAGC GCCGTCGCCG ACGACATCGA CCGCAGCCTC
ATCCGCGAGC AGGTCGAGAT GGGCGTCGCC GTCCGCATGG CCGTGCTCGA TGCGCTCTCG
CGGAACCTGC CCAATGAGCT TCCCCTCGCC GGAGGCCGCT CATGA
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| Protein sequence | MKPNTRPPAR PIPPCRTPES ALYNAALMTS AEKQLQPLFP HRHLLGIEGL SPTDITSLLD
LADTYVEQNR QVDKKGSVLR GRTQINLFFE ASTRTQSSFE LAGKRLGADV MNMSVSSSSV
KKGETLIDTA VTLNAMHPDL IIIRHQNSGA VELLAQKVSC SVINAGDGAH EHPTQALLDA
LTIRRRKGRL QGLIVAICGD ILHSRVARSN ILLLNAMGAR VRVVAPPTLL PAGIERLGVE
VFHDMAKGLE GVDIVMMLRL QLERMAGSYV PSQREYFHFY GLDYAKLAHA KPDALVMHPG
PMNRGVEIDS AVADDIDRSL IREQVEMGVA VRMAVLDALS RNLPNELPLA GGRS
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