Gene Plav_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2829 
Symbol 
ID5454412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3031281 
End bp3031706 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID640878410 
Producthypothetical protein 
Protein accessionYP_001414093 
Protein GI154253269 
COG category[S] Function unknown 
COG ID[COG5349] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.162886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.543485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCC CGATGGACAT GTCCGAGCCT CACATCTACG AGACGGCCGA GATCTCTCCC 
CGCCCGGCCT TCCCGGCGAT CCTTCGCGGC TTCGGCGGCC ATTGCCCGGC CTGTGGCACC
GGCAGCCTCT TCCGCCGTTT CCTGAAAGTG ACGGACAGCT GCGCCCATTG CGGCGAGGAA
CTCCATCACC ACGAAGCGGA CGACGCCCCG CCCTATTTCA CCATCATGAT CGTCGGCCAC
ATCGTCGTGC CGCTCATGCT CTGGGTGGAG CTGGCCTATC TCCCGCCGCT CTGGATTCAC
GCCCTGGTCT GGCCCGCGCT CACCCTCGTC CTTTCGCTCT GGCTCCTGCC CCGCGTCAAG
GGCTCCGTCG TCGGCTGGCA ATGGGCGCTC CGCATGCACG GCTTCGACGG CGTGACCCGC
GACTGA
 
Protein sequence
MSIPMDMSEP HIYETAEISP RPAFPAILRG FGGHCPACGT GSLFRRFLKV TDSCAHCGEE 
LHHHEADDAP PYFTIMIVGH IVVPLMLWVE LAYLPPLWIH ALVWPALTLV LSLWLLPRVK
GSVVGWQWAL RMHGFDGVTR D