Gene Plav_2807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2807 
Symbol 
ID5454447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3010975 
End bp3011940 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID640878389 
Productglyoxylate reductase 
Protein accessionYP_001414072 
Protein GI154253248 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.949498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCC CGCGCATTCT CGTCACCCGC AAGCTTCCCC CGGCCGTCGA AGCCCGCGCC 
CAGCGGGACT ACGAAGCCCT GCTAAATACC GATGATTGCT TGCTGAATCG CGATGAGCTC
GTCGCCCGCG CGCAAGGGGC CGAGGGGCTT CTGGCTACGG TGACGGACCG TCTCGACGCA
GCCCTCGTCG CGGCGCTACC CGTCAGTATA CGGATCATTT CCACTTTCTC CGTCGGCTAC
GACCACATAG ATATCCCCGC CGCTACCGCT CGTGGCATCG CCGTCACCAA CACACCCGAT
GTACTCACGG ACGCCACCGC CGAGATCGCC TTGCTGCTGA TGCTCGGCGC CGCGCGCGGC
GCAACACCCG CCATTTCCGC GCTCCGCGAA GGCCGCTGGA ACAACTGGGC ACCCACTGGA
ATGCTGGGGA TCGAACTCGC GGGCAAGCGC CTAGGCATTC TCGGCCTCGG CCGCATCGGC
CGCGCAACAG CGGCCCGCGC CCGCGCCTTC GGCATGGAAA TCCACTATCA CAGCCGCCGC
CGCGTCTCGC CGGAACTGGA GGCGGGCGCG ACCTATCACG CTGATCCCGC TGCGCTTTTT
CGTGTTTCCG ATGTCCTGTC CATCCATTGC GCCTCGACGC CGGAGACGCG CTGCCTCGTC
AATCGCGACA CCCTCGCCCT CCTCCCGCCG AACGCGATCG TCGTCAATAC GGCGCGCGGC
GACATCGTGA ATGACGACGC CCTGATCGAA GCCCTGTCGT CCGGACGCAT TGCAGCAGCG
GGGCTCGACG TCTTCAACAA CGAGCCGAAC TTCCATCCCG GATATCTGGC TCTTTCCAAC
GCTTTTCTGC TTCCCCATCT CGGCAGCGCC ACGCTCGAAA CGCGCAACGC CATGGGCTTC
CGCGCACTCG ACAACCTCGA TGCCTTCTTC GCCGGCCGTC CTCCATCGGA CCTGGTGGCC
GGATGA
 
Protein sequence
MPRPRILVTR KLPPAVEARA QRDYEALLNT DDCLLNRDEL VARAQGAEGL LATVTDRLDA 
ALVAALPVSI RIISTFSVGY DHIDIPAATA RGIAVTNTPD VLTDATAEIA LLLMLGAARG
ATPAISALRE GRWNNWAPTG MLGIELAGKR LGILGLGRIG RATAARARAF GMEIHYHSRR
RVSPELEAGA TYHADPAALF RVSDVLSIHC ASTPETRCLV NRDTLALLPP NAIVVNTARG
DIVNDDALIE ALSSGRIAAA GLDVFNNEPN FHPGYLALSN AFLLPHLGSA TLETRNAMGF
RALDNLDAFF AGRPPSDLVA G