| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2800 |
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| Symbol | |
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| ID | 5454852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3004302 |
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| End bp | 3005918 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640878382 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001414065 |
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| Protein GI | 154253241 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.350365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.74213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCC TGAACGGGGC GGCGATTGCC GCAGTAATAT TGTTTACGGC TGCTTGTTCC
GAAAACGATG AGTACACGCA AAGCGCCGTG ACTCCGCCTT CGCCGTTTCA TGGCATTCAC
GGCATCACGG TCACAAAGGA AGGCAAGATT CTGGCGGGCA GCGTCTTCGG GCGCGCTATC
TACGAGATCG ACGGAGAAAC CGGGGAAACA AGCATATATG AAGCGCCACC CGAGGGGATG
GCCGATGATC TTGAGCAAGG CCCTGACGGT ACACTCGCGT GGACTGCGTT TCTCGACGGT
AAGGTATATG CACGACGGAC AGATGGCACG TTGCTGACGC TCGCCGAGGG CTTGCCGGGT
CTCAACTCCC TCGCATGGAC CGACGATGGC CGGCTATTCG CTACCCAGGT ATTTCTCGGC
GACGCACTTT ACGAACTCGA CCCGTCAGGA GAAGCAGCGC CGCGAAAAAT CATGGAGGGC
ATGGGCGGGC TGAACGGTTT TGACTTCGGG CCCGACAGAA AACTTTACGG CCCCCTCTGG
TTCAAAAAGC AGATCGTGCG CGTAGACGTC GATGCAGGAA CGCTCGAAAT CGTTGCCGAG
GGCTTCAAAA CGCCAGCCGC GGCAAACTTC AATACGAAAG GCGAACTCTT CGTTGTCGAT
ACCGAAGCCG GTCACGTCTA TACCGTGGAA ACGGCCACTG GAGAAAAGAC GCTGATATCC
GAGGTGGCGC CAGCGATCGA CAATCTTGCT TTCGACAATG AAGACAACCT CTATATCACC
AACATGGCGG ATAATGCCGT CATTGAAATC GACACATCGA CCGGCGAAGC CCGCACAATC
GTTTCCGGCA CACTCGCCGT CGCTGGTGGC ATCGCATTCG GAAACACAGA TGCTGATGCC
GGCCTTTATG TCGCCGATCT TTTCGCATTA CGAAAAGTTG CCCCGGAAGA TGGCTCCGTC
ACGGAAATGG CCCGCGTTTG GTCTTCGGAG ATCGATTATC CGCTCAGCGT AACTGTTGCC
AACGGAACAA TTGCGGTCGC GGCGTTGACG GCCGGCGCTG TACAGGTGTT CGACCAGGAA
AGCGGTGAGT CGTTAGGCCT CCATCATGGC TTCACGACAC CGGCCGACGC CATTGCCCTT
CCCGATGGCG ATGTTCTCGT CTCGGAATAT GCGCGCGGCG CTGTTGTCCG CGTCGATGGC
AACGATTGGT CCAAACGAAA TGACCTAGCC ACCGGCCTTG GCGGTCCCGC AATGATGAAG
CTCGATGGCA GTGGTCATCT TTATGTAAGC GAACATCAGG GCGGCAGCAT CGCCCGCATC
GACATCGAAA GCGGAGAGCG CACCGTCGTG GCCGAAGGAC TGTCGGCGCC GGAGGGCTTC
GACGTCACCC CGGATGGCCG TCTGGTCGTA GCTGAGGTCG GCGCGAAACG CATCGTTATC
ATCGATATCA AGAGCGGAGA AAAGGTAACG GTGAAAGAAA ATCTCCCTAT CGGCTTTGAA
GGGCCGGAAT CCGCTCCGGC GATCTTCATT CCTACCGGCG TCGCCGTCGC ACCGAACGGA
GATATTTATT ACTCGTCCGA CATCGACGTG GCGATTTATA GACTGAAGAA AGGCTGA
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| Protein sequence | MKCLNGAAIA AVILFTAACS ENDEYTQSAV TPPSPFHGIH GITVTKEGKI LAGSVFGRAI
YEIDGETGET SIYEAPPEGM ADDLEQGPDG TLAWTAFLDG KVYARRTDGT LLTLAEGLPG
LNSLAWTDDG RLFATQVFLG DALYELDPSG EAAPRKIMEG MGGLNGFDFG PDRKLYGPLW
FKKQIVRVDV DAGTLEIVAE GFKTPAAANF NTKGELFVVD TEAGHVYTVE TATGEKTLIS
EVAPAIDNLA FDNEDNLYIT NMADNAVIEI DTSTGEARTI VSGTLAVAGG IAFGNTDADA
GLYVADLFAL RKVAPEDGSV TEMARVWSSE IDYPLSVTVA NGTIAVAALT AGAVQVFDQE
SGESLGLHHG FTTPADAIAL PDGDVLVSEY ARGAVVRVDG NDWSKRNDLA TGLGGPAMMK
LDGSGHLYVS EHQGGSIARI DIESGERTVV AEGLSAPEGF DVTPDGRLVV AEVGAKRIVI
IDIKSGEKVT VKENLPIGFE GPESAPAIFI PTGVAVAPNG DIYYSSDIDV AIYRLKKG
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