| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2798 |
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| Symbol | |
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| ID | 5456202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3001363 |
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| End bp | 3003747 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640878380 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001414063 |
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| Protein GI | 154253239 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.920783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.754609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACGT TTTCACGCAG CCTAGAAGAG GGCCTTCACC GCGCGCTCGC CCTTGCTAAT
GAGCGGGATC ATGAATACGC AACCCTGGAA CATCTTCTGC TTTCGCTGAT GGATGATCAG
GATGCCGCGG CTGTAATGCG CGCCTGCAAT GTCGATATGG ACATGTTGCG GCAGCAACTC
ACCAATTATG TCGACAACGA ACTGTCCAGC CTCGTGGTCG AGAACGGCGA GGACTCAAAG
CCCACGGCAG GTTTCCAGCG CGTGATTCAG CGTGCCGTCA TTCATGTGCA ATCTTCCGGG
CGTGAGGAAG TGACGGGAGC AAACGTACTC GTCGCCATGT TCGCCGAACG GGAGAGCCAT
GCGGCCTACT TCCTGCAGGA GCAGGATATG ACCCGCTACG ACGCGGTGAA CTATATCAGT
CACGGTATCG CGAAACGCGG CGATATGAGC GAAACGCGTC CCGTGCGTGG TGCGCAGGAA
GAGCCGGAGA CTGGAGAGCG GACACGCAAG GAGCGCACGA CGGAAGCTCT CGACAATTAC
TGCGTCAATC TCAACGACAA GGCGAAGCAG GGTAAAATCG ATCCGCTGAT TGGCCGCGAG
CGAGAGGTGG AGCGGACTAT CCAGATCCTT TGCCGCCGCT CGAAAAACAA TCCGCTTTTC
GTAGGCGATC CGGGGGTGGG CAAGACGGCC ATTGCGGAGG GGCTGGCGCG CCGCATCGTG
AAGGGCGAAG TGCCGGAGGT GCTGCGCAAT GCGACGATCT TCTCGCTCGA CATGGGGACC
TTGCTTGCCG GAACGCGGTA TCGGGGTGAT TTCGAGGAGC GCATCAAGGC GGTCATCAAG
GAGATTGAGG CCTATCCAGG GGCCATCATG TTCATCGATG AAATCCATAC CGTGATCGGA
GCGGGGGCGA CGAGCGGCGG GGCCATGGAT GCTTCGAATC TGCTCAAGCC CGCGCTGGCG
AGCGGCTCAG TGCGTTGTAT CGGGTCGACT ACCTACAAGG AGTACAGGCA GCACTTCGAG
AAGGACCGTG CGCTGGTGCG GCGGTTCCAG AAGATCGACG TGGCAGAGCC GTCCGTGCCA
GACACGATCA AAATACTGAA GGGGCTGAAG CCTTATTTCG AGGAGTTCCA CAAGGTCCGC
TACACGAACG ATGCCGTAAA GGCGGCCGTA GACCTGTCCG CAAAGTATAT GCACGACCGC
AAGCTGCCGG ATAAGGCGAT TGATGTTATC GACGAAGCGG GCGCTTCGCA GATGCTCTTG
CCGGAGTCTC GCCGGAAGAA AACGATTGGT GTCGCCGAGA TTGAAGCCGT TATCGCCACG
ATGGCGCGAA TTCCGCCGAA ATCTGTATCC AAGAGCGACA CTGAAAAGCT GAAGGATCTG
GACACCGAAC TGAAGCGAGT GGTCTTTGGG CAGAATGCCG CAATCGATGC GCTGGCAGCT
TCAATCAAGC TGGCCCGCGC TGGTCTGCGC GAAGCGGAAA AGCCTATCGG CTGCTACCTC
TTCTCAGGCC CGACCGGTGT GGGAAAGACC GAAGTGGCGC GTCAGCTCGC ATCGGTGCTT
GGCGTGGAAA TGCTTCGCTT CGATATGTCG GAGTACATGG AGCGACACAC AGTGTCGCGC
CTCATAGGTG CGCCGCCCGG CTATGTTGGT TTTGACCAGG GCGGTCTCTT GACGGACGGC
GTCGATCAGC ATCCTCATTG CGTGCTGTTG CTCGACGAAA TTGAAAAGGC GCATCCGGAT
CTTTTCAATA TTCTTTTGCA GGTGATGGAT CACGGCAAAC TTACGGATCA CAACGGCAAG
AAGATCGATT TCCGCAATGT CGTCCTTATC ATGACGACGA ATGCGGGCGC TGCGGATATG
GCGAAGCCGA CCATAGGCTT TGCCCAGAAA AAGCGTACGG GTGACGACGA GGATGCAATC
AAACGGCTCT TCACACCGGA GTTTCGCAAT CGTCTCGATG CAGTGATTCC TTTTGGGCAT
CTGCCGCAGG AAGTCATCGC TCAGGTGGTG GAAAAGTTTG TTCTGCAGTT GGAAGTGCAA
CTGGCGGATC GCAATGTCAC GATCGAACTC ACGCCTGAGG CGAATAGCTG GCTCGCAGAG
CGCGGCTATG ACGAGCAGAT GGGCGCGCGC CCGCTTGCTC GCGTTATTCA GGAGAACATC
AAGAAGCCGC TTGCTGATGA AGTGCTCTTT GGACGGCTCG TCAAGGGCGG GCATGTGATC
GTGACTGTGA AGGACGATGC TCTCGCTTTC GATATCGAGG CGGTCGTTCC GAAGAGTCAG
AGCGGAGGTC CCAAGAAGCC GGGTGCGCGC AAGCCGGGTG ACGGCTCGGG CGGGCCTGGG
TCGGGCGGCG GTACCGTACC CAAGGTTCCT TTGCTGGTGG ATTGA
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| Protein sequence | MPTFSRSLEE GLHRALALAN ERDHEYATLE HLLLSLMDDQ DAAAVMRACN VDMDMLRQQL
TNYVDNELSS LVVENGEDSK PTAGFQRVIQ RAVIHVQSSG REEVTGANVL VAMFAERESH
AAYFLQEQDM TRYDAVNYIS HGIAKRGDMS ETRPVRGAQE EPETGERTRK ERTTEALDNY
CVNLNDKAKQ GKIDPLIGRE REVERTIQIL CRRSKNNPLF VGDPGVGKTA IAEGLARRIV
KGEVPEVLRN ATIFSLDMGT LLAGTRYRGD FEERIKAVIK EIEAYPGAIM FIDEIHTVIG
AGATSGGAMD ASNLLKPALA SGSVRCIGST TYKEYRQHFE KDRALVRRFQ KIDVAEPSVP
DTIKILKGLK PYFEEFHKVR YTNDAVKAAV DLSAKYMHDR KLPDKAIDVI DEAGASQMLL
PESRRKKTIG VAEIEAVIAT MARIPPKSVS KSDTEKLKDL DTELKRVVFG QNAAIDALAA
SIKLARAGLR EAEKPIGCYL FSGPTGVGKT EVARQLASVL GVEMLRFDMS EYMERHTVSR
LIGAPPGYVG FDQGGLLTDG VDQHPHCVLL LDEIEKAHPD LFNILLQVMD HGKLTDHNGK
KIDFRNVVLI MTTNAGAADM AKPTIGFAQK KRTGDDEDAI KRLFTPEFRN RLDAVIPFGH
LPQEVIAQVV EKFVLQLEVQ LADRNVTIEL TPEANSWLAE RGYDEQMGAR PLARVIQENI
KKPLADEVLF GRLVKGGHVI VTVKDDALAF DIEAVVPKSQ SGGPKKPGAR KPGDGSGGPG
SGGGTVPKVP LLVD
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