Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2779 |
Symbol | |
ID | 5455533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2979417 |
End bp | 2980421 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640878361 |
Product | kelch repeat-containing protein |
Protein accession | YP_001414044 |
Protein GI | 154253220 |
COG category | [S] Function unknown |
COG ID | [COG3055] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0178297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCG GGTGTCATTC GAACCGCGTT TTGGCGCTGG TGTTTCTCTG CCTGTTGGCG CCGGGCGCGG CGGCGGCAGA AAGTTGGCGC GACGGTTCTC CAATGACCAC AGGCCGTGCC TTTGCGGGTG GAGCGCTGGT CGGCAATGAG CTCTATGTCA TCGGCGGCGA CAGCACCTCC GGTCCGCGTA ACGTCGCGGA AATTTACGAC ATGCGCGGTG ATATCTGGCG TGCATCGCCG GGTCTTCCGG TCGGCCTGCA GCAATTCGGT ATCGCGGAGC TAAACGGGAA GCTTTACGTC TCCGGCGGCT ATGAGGCGCC GCAGGCCGGG CGCCCTGAAT TCGGAGCGTT TGGCGAAATT CTTCCGCCCA CCACAGAAGG CGGCGATACC GCGCAGACAT GGATATACGA TCCGCAGATC GGTACATGGG TAAACGGTCC CCAATTGCCC GCTGCGCGGG CAGGGCATGG CGCTGCGGTG GTGGATGGCA AAATCTATAC GCTCGGTGGC CGCGGCTCCG ATGCGCAGCG TGTGCTGGTC TATGACCCGG GCAGCAACCG CTGGAGCGCG ACGGGGGAGG CCATGCCGGC GCCGCGCGTG GCGGCGGCGA CAGTCGCTGT CGGCGACCGC ATCTACGTCA TCGGCGGATT GAGCAACGGC GTTGCGACAG CACGCGTGGA CATTTTCGAC ACAGCGAGCG GCCGTTGGCA GAGCGGCCCG CAACTGCCTG AAGCCCGCTC CGGCCATGTT GCCGCGCTGG TGGGTGGGAA GCTGCATGTA ACGGGTGGCG AGCAGCGCCG TCCGCCACGT ACCTTTGGCG ATCATTTCAT TCTCGATGCC GAAGCCGGAT CATGGAGCCG TGCCGTGCCG ATGCCCAATC CGCGGCACGG TGCGGTCGCG GCGGCTGTTG ACGGGAAGTT CGTCGTGGTC GGCGGCAGTC CGGGTGCCGG TGTTTATACC GTCTTCACGG AATCCGACGT GGTGGACATC TACTCCGCCG ATTAG
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Protein sequence | MSSGCHSNRV LALVFLCLLA PGAAAAESWR DGSPMTTGRA FAGGALVGNE LYVIGGDSTS GPRNVAEIYD MRGDIWRASP GLPVGLQQFG IAELNGKLYV SGGYEAPQAG RPEFGAFGEI LPPTTEGGDT AQTWIYDPQI GTWVNGPQLP AARAGHGAAV VDGKIYTLGG RGSDAQRVLV YDPGSNRWSA TGEAMPAPRV AAATVAVGDR IYVIGGLSNG VATARVDIFD TASGRWQSGP QLPEARSGHV AALVGGKLHV TGGEQRRPPR TFGDHFILDA EAGSWSRAVP MPNPRHGAVA AAVDGKFVVV GGSPGAGVYT VFTESDVVDI YSAD
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