Gene Plav_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2758 
Symbol 
ID5456436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2958317 
End bp2958685 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID640878339 
Productribosomal protein S13 
Protein accessionYP_001414023 
Protein GI154253199 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.221978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCGTA TCGCTGGCGT CAACATCCCG ACCAACAAGC GGGTGGTCAT TGCGCTGACC 
TATATCCATG GCATTGGCAA CACCAAGGCC AAGGAAATCT GCGGCACCGT CGGTATCCCG
GCCGAGCGCC GCGTGAACGA GCTGACAGAC GCCGAGGTCA TCCAGATCCG CGAAGCGATC
GACCGCGACT ATCTGGTCGA AGGCGATCTG CGCCGCGAAG TTTCCATGAA CATCAAACGT
CTCATGGACC TCGGTTGCTA TCGCGGCCTG CGCCACCGCA AGGGCCTGCC GGTGCGCGGC
CAGCGGACGC ACACCAACGC GCGCACCCGC AAGGGTCCGG CGAAGGCGAT TGCCGGCAAG
AAGAAGTAA
 
Protein sequence
MARIAGVNIP TNKRVVIALT YIHGIGNTKA KEICGTVGIP AERRVNELTD AEVIQIREAI 
DRDYLVEGDL RREVSMNIKR LMDLGCYRGL RHRKGLPVRG QRTHTNARTR KGPAKAIAGK
KK