Gene Plav_2739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2739 
SymbolrplB 
ID5455098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2948684 
End bp2949520 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID640878320 
Product50S ribosomal protein L2 
Protein accessionYP_001414004 
Protein GI154253180 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.236416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.312063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA AAAAATATAA ACCGACAAGC CCCGCGCAGC GCGGTCTCGT GCTGGTCGAC 
CGCTCGGCCC TCTACAAGGG CAAGCCGGTC AAGGACCTCA CCGAAGGACT GACCAAGTCC
GGCGGCCGCA ACAACCACGG CCGCATCACG GTGCGGTTCC GGGGCGGCGG GCACAAGCGC
AGCTATCGCA CGGTCGATTT CAAGCGCCGC AGGTATGACG TGCCGGCGAC GGTCGAGCGG
CTCGAATACG ATCCGAACCG TACCGCGTTC ATCGCGCTCG TGAAGTATGA AGACGGTGAG
CTCGCCTACA TTCTGGCGCC GCAGCGTCTG CAGCCGGGCG ATGTGGTGAT CTCGGGTAGC
CGCGTGGACG TGAAGCCGGG CAATGCGATG CCGCTGGCGA ACATTCCGGT CGGCACCATC
GTCCACAATG TGGAGATGAA GCCGGGCAAG GGCGGTCAGA TCGCGCGTTC GGCCGGCACT
TATGTGCAGC TCGTCGGCCG CGACCAGGGT TACGCGCTGC TCCGTCTTTC GTCGGGCGAA
CAGCGCATGG TTCCGGCGAC CTGCATGGCA TCGATTGGCG CCGTCTCCAA TCCGGACCAC
TCGAACATCA CCATTGCGAA GGCGGGCCGC AATCGCTGGC TTGGCAAGCG TCCGCATGTT
CGCGGCGTCG TCATGAACCC GGTCGACCAT CCGCATGGCG GTGGTGAAGG CCGCACCTCG
GGTGGCCGTC ATCCGGTCAC GCCTTGGGGC AAGCCGACCA AGGGCAAGAA GACACGCGCC
AACAAGGCGA CGGACAAGTA TATCGTCCGC AGCCGTCACC AGAAGAAGAA GGGTTAG
 
Protein sequence
MALKKYKPTS PAQRGLVLVD RSALYKGKPV KDLTEGLTKS GGRNNHGRIT VRFRGGGHKR 
SYRTVDFKRR RYDVPATVER LEYDPNRTAF IALVKYEDGE LAYILAPQRL QPGDVVISGS
RVDVKPGNAM PLANIPVGTI VHNVEMKPGK GGQIARSAGT YVQLVGRDQG YALLRLSSGE
QRMVPATCMA SIGAVSNPDH SNITIAKAGR NRWLGKRPHV RGVVMNPVDH PHGGGEGRTS
GGRHPVTPWG KPTKGKKTRA NKATDKYIVR SRHQKKKG