| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2731 |
|---|
| Symbol | rpsL |
|---|
| ID | 5456251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2942394 |
|---|
| End bp | 2942765 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640878312 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_001413996 |
|---|
| Protein GI | 154253172 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.249536 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCG TCAACCAACT GATCCGCAAG CCGCGCAAGC CGCTTGTGAA GCGAAATAAA
GTACCGGCCA TGCAGGCCTG CCCGCAGAAG CGCGGCGTCT GCACGCGTGT CTATACGACG
ACGCCGAAGA AGCCGAACTC CGCTCTGCGT AAGGTCGCCC GTGTGCGCCT GACCAACCAG
TTCGAAGTGA CGAGCTATAT TCCCGGCGAA GGCCACAACC TGCAGGAGCA CTCCGTGGTG
CTCATCCGCG GCGGCCGCGT GAAGGATCTT CCCGGTGTCC GCTACCACAT CATCCGCGGT
GTGCTCGATA CGCAGGGCGT GAAAGACCGC CGCCAGCGTC GTTCGAAGTA CGGCGCGAAG
CGTCCGAAGT AA
|
|---|
| Protein sequence | MPTVNQLIRK PRKPLVKRNK VPAMQACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNQ
FEVTSYIPGE GHNLQEHSVV LIRGGRVKDL PGVRYHIIRG VLDTQGVKDR RQRRSKYGAK
RPK
|
|---|
| |