Gene Plav_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2725 
SymbolrplK 
ID5454735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2930570 
End bp2930998 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content60% 
IMG OID640878306 
Product50S ribosomal protein L11 
Protein accessionYP_001413990 
Protein GI154253166 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.053271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.344751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA AAATCGAAGG TTACATAAAA CTGCAGGTGC CTGCAGGCGC GGCAAATCCG 
TCGCCGCCGA TTGGCCCCGC GCTCGGTCAG CGCGGTCTCA ACATCATGGA ATTCTGCAAG
GCATTTAATG CTGCCACGCA GAAGATGGAA CAAGGCATGC CGATCCCGGT CGTGATTACG
GCCTTCTCGG ACCGTTCCTT TACTTTCGCG ATGAAGACGC CGCCTGCCTC GTACTTCCTG
AAGAAGGCCG CGAAGGTGAC GTCGGGTTCC AAGACCCCGG GCCGCGCCAG CGCCGGCACC
GTGACCGTCG CCCAGTGCCG CGAGATTGCC GAAGCGAAGA TGGCGGACCT GAACGCCAAC
GATCTCGATC AGGCGACAAA GATTATTGCC GGTTCCGCCC GTTCCATGGG CCTTCAGGTA
GTGGAGTGA
 
Protein sequence
MAKKIEGYIK LQVPAGAANP SPPIGPALGQ RGLNIMEFCK AFNAATQKME QGMPIPVVIT 
AFSDRSFTFA MKTPPASYFL KKAAKVTSGS KTPGRASAGT VTVAQCREIA EAKMADLNAN
DLDQATKIIA GSARSMGLQV VE