Gene Plav_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2717 
Symbol 
ID5454206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2921927 
End bp2923294 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content62% 
IMG OID640878294 
Productglutamine synthetase catalytic region 
Protein accessionYP_001413982 
Protein GI154253158 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.648356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG CGAGTGAAAG TGAAGCAGCG GAGTTTCTCG CCGCTCATCC GGATACAGTC 
CAGATTCAGG CTTTCCTCAC CGACCCGTCT GGCGTGGCGC GCGGCAAGGT GCTGCGCCCG
GAAGAACTTC TTCCAGCCTA TCGTGACGGG CGGCCACTCC CCTGCTCCAT CCAATCTCTC
GATATGCTCG GCGCGGACGT TCTTGAAACC GGCCTCGTCT GGGAAGAGGG CGACAGCGAC
CGTCCCTGCT ATCCCGTCGC CGGCACCCTC ACCCACGCGC CCTGGCACGA CGTGCCGACC
GCGCAATTAA TTCTCGCATC TTACGAACGC GATGGCTCGC CGACACCGGC AGACCCGCGC
CACGCACTCG CACGCACCGT CGCCGCGCTG GAAGCGAAAG GCCTCGTTCC GGTCGTGGCC
ATCGAGTTGG AGTTCTATCT GATCGACCCT GATGTCGCCC TTTCCGGCAA GCCGAAGCCG
CCCACCGCGC CGAACGGCTT CTCGCCCGCA CACCTTCAGG CCTATCTGAT GCAGGATCTT
GAGGACTTCG CACCTTTCCT CAATGAGGTC TTCGCCGGCG CAAAGAAGAT GGGGCTGCCC
GCCCGCACGC TCATTTCCGA ATACGCACCC GGCCAGTTCG AGATCGTGCT TGCGCACCGC
GCCGACGCGA TGCGCGCTGC CGATGATGCC ATTCTCTACA AGCGTCTCGT GAAAGGCGTC
GCGGATCGCC ATGGCTATGT CGCGACTTTC ATGGCCAAGC CCTATGCCGA AACCTCCGGC
AGCGGCATGC ATGTCCATGT CTCACTCGCG GACGAGGAGC ATGAAAATCT CTTCGCTGGC
AACGGCATCG AGCTTACGCA CCATCTTCGT CATGCAATCG GCGGCCTTGA GGCAACGATG
GCGGAAAGCA TGGCCATCTT CGCACCCAAC GCCAATTCCT TCCGCCGCTT TCGTCGCAAC
ACCTACGCCC CGCTCAATCC AGCATGGGCT TTCGATAACC GCTCGGTGCC CCTCCGCATA
ACGGCAGGCA AGCCCGAAAC GCGCCACCTG GAGCACCGTG TCTGCGGCGC CGACGCAAAT
CCATACGTAG CCCTCGCCGC CGTTCTTGCC GGCATAGCCA CGGGGATCGA AAATGAGATC
GAGCCGAGCG CCCCGGTCAC GGGAGATGGA TACAGGCATG AGCAGGAAGC CACGTTGCCC
ATGAACTGGT GGAAAGCACT GGAGGCCGCT CGCAGCTCCG CATTTTTGTC CGAATATCTG
GGTAAGGAGT TCATGAACAT CTTCCTCACC ATCAAGGAAG CGGAATGCGA TCGCTTCTTC
GCGGCAATCA GCGATCTCGA TTTCGCCTGG TACCTTCGCA ACGCCTGA
 
Protein sequence
MTRASESEAA EFLAAHPDTV QIQAFLTDPS GVARGKVLRP EELLPAYRDG RPLPCSIQSL 
DMLGADVLET GLVWEEGDSD RPCYPVAGTL THAPWHDVPT AQLILASYER DGSPTPADPR
HALARTVAAL EAKGLVPVVA IELEFYLIDP DVALSGKPKP PTAPNGFSPA HLQAYLMQDL
EDFAPFLNEV FAGAKKMGLP ARTLISEYAP GQFEIVLAHR ADAMRAADDA ILYKRLVKGV
ADRHGYVATF MAKPYAETSG SGMHVHVSLA DEEHENLFAG NGIELTHHLR HAIGGLEATM
AESMAIFAPN ANSFRRFRRN TYAPLNPAWA FDNRSVPLRI TAGKPETRHL EHRVCGADAN
PYVALAAVLA GIATGIENEI EPSAPVTGDG YRHEQEATLP MNWWKALEAA RSSAFLSEYL
GKEFMNIFLT IKEAECDRFF AAISDLDFAW YLRNA