Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2716 |
Symbol | |
ID | 5455062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2921280 |
End bp | 2921837 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640878293 |
Product | hypothetical protein |
Protein accession | YP_001413981 |
Protein GI | 154253157 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.451978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTC GTACCCATGT GGCTGTCACA GCCGCTCTTC TCGCCTTCGC GCCGCTCTCC GCGGTTCCGC TCGCCGCACA GAACGCCGCG CCTGGCATGG CGGAAGAAAT GAAGGAAATC ACGACCGAGC AATACGTCAA CAAAGCCGCT TTAGGCGACC TTTTTGAAAT CCAATCGAGC GAAATCGCTC TCTCGAGGTC GGGAAATGAC GACATCAAGG CTTTCGCCGA GATGATGGTC GAAGATCACA CCGCATCATC CGACAAGCTG AGCGCCGCCG TATCGGAAGG CGGCAGTCGC GCCCAGATTC CGACCACACT TGATCCGGCG CATGAAGAAA AAATCAGCCA GCTGCGGAAT GCGGACGAAG GCGAATTCGA CGCTCTCTAT CTGGAAATGC AGGAGGAAGC ACACGAGAAG GCTCTGCAAC TCCACCGCGC CTATGCAGCG AATGGCGACG ATGAGGCGCT GCGAAATATT GCCGACGAAA TGGTGCCCGT GATCGAAGGC CACCATGAAA AGGTGAAAAG TCTTCGCGAA AGCGAAGACG CCTCCTGA
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Protein sequence | MRIRTHVAVT AALLAFAPLS AVPLAAQNAA PGMAEEMKEI TTEQYVNKAA LGDLFEIQSS EIALSRSGND DIKAFAEMMV EDHTASSDKL SAAVSEGGSR AQIPTTLDPA HEEKISQLRN ADEGEFDALY LEMQEEAHEK ALQLHRAYAA NGDDEALRNI ADEMVPVIEG HHEKVKSLRE SEDAS
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