Gene Plav_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2716 
Symbol 
ID5455062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2921280 
End bp2921837 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content57% 
IMG OID640878293 
Producthypothetical protein 
Protein accessionYP_001413981 
Protein GI154253157 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.451978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTC GTACCCATGT GGCTGTCACA GCCGCTCTTC TCGCCTTCGC GCCGCTCTCC 
GCGGTTCCGC TCGCCGCACA GAACGCCGCG CCTGGCATGG CGGAAGAAAT GAAGGAAATC
ACGACCGAGC AATACGTCAA CAAAGCCGCT TTAGGCGACC TTTTTGAAAT CCAATCGAGC
GAAATCGCTC TCTCGAGGTC GGGAAATGAC GACATCAAGG CTTTCGCCGA GATGATGGTC
GAAGATCACA CCGCATCATC CGACAAGCTG AGCGCCGCCG TATCGGAAGG CGGCAGTCGC
GCCCAGATTC CGACCACACT TGATCCGGCG CATGAAGAAA AAATCAGCCA GCTGCGGAAT
GCGGACGAAG GCGAATTCGA CGCTCTCTAT CTGGAAATGC AGGAGGAAGC ACACGAGAAG
GCTCTGCAAC TCCACCGCGC CTATGCAGCG AATGGCGACG ATGAGGCGCT GCGAAATATT
GCCGACGAAA TGGTGCCCGT GATCGAAGGC CACCATGAAA AGGTGAAAAG TCTTCGCGAA
AGCGAAGACG CCTCCTGA
 
Protein sequence
MRIRTHVAVT AALLAFAPLS AVPLAAQNAA PGMAEEMKEI TTEQYVNKAA LGDLFEIQSS 
EIALSRSGND DIKAFAEMMV EDHTASSDKL SAAVSEGGSR AQIPTTLDPA HEEKISQLRN
ADEGEFDALY LEMQEEAHEK ALQLHRAYAA NGDDEALRNI ADEMVPVIEG HHEKVKSLRE
SEDAS