Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2714 |
Symbol | |
ID | 5454705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2919769 |
End bp | 2920653 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878291 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001413979 |
Protein GI | 154253155 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.199953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCG ACCTGCAGGG CAAGACGGCG TTCGTAACGG GCGGCGCCAG CGGCATCGGC CTTTCGATGG CCAGGGCATT CGGCGCCGCC GGCATGAACG TCATGCTGGC CGACATCAAC GAAGACGATC TCGGGGTGGC CGTCGCCGAG CTGAACGAGC GGCAAATCAA GGCGGCAGGC GTTCGCTGCG ATGTCGCGGA CCGCAAATCG CTGGAGCAGG CGGCGGAAGA AACCGTCGCG ACCTATGGCA AGGTGCATGT CGTCTGCAAC AATGCAGGCG TGGGTGCAGG TGGCGCGATC GGCACTGTGA AGCCTGGCGA CTGGGACTGG ACCATCGCAG TGAACCTGAT GGGCGTCGTT TACGGCACGG AAGCCTTTCT CCCTCACATC CGCGCGCATG GCGAGGGCGG ACATTTCGTC AACACGGCGT CGATGGCGGG CATGATTTCC GTTCCCGGAA TGGAGCCTTA CACTGCGTCA AAATACGCCG TTGTCGGCAT GTCGGAGGGA TGGGCGGGAC AGCTTGCGCC GGAGAATATC GGCGTATCGG TGCTTTGTCC CGGCTTCGTG CGTACCCGCA TCCACGAAAG CGGGCGCGCG CGGCAAGAAA AGTTCGGGCC GGCCGCGACC GACGAGCGGG ATCCCGCTCG GATCGAGGCG GCGAAGCAAC TGGTGCTTGG CGGGCTCGAT CCGGACCGGG TCGGCGCGCG GGTGCTGGAA GCCATACAGG CCAACGAGCT CTATATTTTT ACACATCCGG ATATGGCGCC GCTCTTCGAG GAGCGTGCGC GCAATATCAT GGCCGCCTTT TTGCGCGCGA GCGAAAGCCC CGCGCTCAGC GGCGCGGCAT ACCAGACGCC GAAGGAAATC AAGGTTTTCG ACTAA
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Protein sequence | MMRDLQGKTA FVTGGASGIG LSMARAFGAA GMNVMLADIN EDDLGVAVAE LNERQIKAAG VRCDVADRKS LEQAAEETVA TYGKVHVVCN NAGVGAGGAI GTVKPGDWDW TIAVNLMGVV YGTEAFLPHI RAHGEGGHFV NTASMAGMIS VPGMEPYTAS KYAVVGMSEG WAGQLAPENI GVSVLCPGFV RTRIHESGRA RQEKFGPAAT DERDPARIEA AKQLVLGGLD PDRVGARVLE AIQANELYIF THPDMAPLFE ERARNIMAAF LRASESPALS GAAYQTPKEI KVFD
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