Gene Plav_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2714 
Symbol 
ID5454705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2919769 
End bp2920653 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content64% 
IMG OID640878291 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001413979 
Protein GI154253155 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.199953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG ACCTGCAGGG CAAGACGGCG TTCGTAACGG GCGGCGCCAG CGGCATCGGC 
CTTTCGATGG CCAGGGCATT CGGCGCCGCC GGCATGAACG TCATGCTGGC CGACATCAAC
GAAGACGATC TCGGGGTGGC CGTCGCCGAG CTGAACGAGC GGCAAATCAA GGCGGCAGGC
GTTCGCTGCG ATGTCGCGGA CCGCAAATCG CTGGAGCAGG CGGCGGAAGA AACCGTCGCG
ACCTATGGCA AGGTGCATGT CGTCTGCAAC AATGCAGGCG TGGGTGCAGG TGGCGCGATC
GGCACTGTGA AGCCTGGCGA CTGGGACTGG ACCATCGCAG TGAACCTGAT GGGCGTCGTT
TACGGCACGG AAGCCTTTCT CCCTCACATC CGCGCGCATG GCGAGGGCGG ACATTTCGTC
AACACGGCGT CGATGGCGGG CATGATTTCC GTTCCCGGAA TGGAGCCTTA CACTGCGTCA
AAATACGCCG TTGTCGGCAT GTCGGAGGGA TGGGCGGGAC AGCTTGCGCC GGAGAATATC
GGCGTATCGG TGCTTTGTCC CGGCTTCGTG CGTACCCGCA TCCACGAAAG CGGGCGCGCG
CGGCAAGAAA AGTTCGGGCC GGCCGCGACC GACGAGCGGG ATCCCGCTCG GATCGAGGCG
GCGAAGCAAC TGGTGCTTGG CGGGCTCGAT CCGGACCGGG TCGGCGCGCG GGTGCTGGAA
GCCATACAGG CCAACGAGCT CTATATTTTT ACACATCCGG ATATGGCGCC GCTCTTCGAG
GAGCGTGCGC GCAATATCAT GGCCGCCTTT TTGCGCGCGA GCGAAAGCCC CGCGCTCAGC
GGCGCGGCAT ACCAGACGCC GAAGGAAATC AAGGTTTTCG ACTAA
 
Protein sequence
MMRDLQGKTA FVTGGASGIG LSMARAFGAA GMNVMLADIN EDDLGVAVAE LNERQIKAAG 
VRCDVADRKS LEQAAEETVA TYGKVHVVCN NAGVGAGGAI GTVKPGDWDW TIAVNLMGVV
YGTEAFLPHI RAHGEGGHFV NTASMAGMIS VPGMEPYTAS KYAVVGMSEG WAGQLAPENI
GVSVLCPGFV RTRIHESGRA RQEKFGPAAT DERDPARIEA AKQLVLGGLD PDRVGARVLE
AIQANELYIF THPDMAPLFE ERARNIMAAF LRASESPALS GAAYQTPKEI KVFD