Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2711 |
Symbol | |
ID | 5453708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2916492 |
End bp | 2917934 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640878288 |
Product | major facilitator transporter |
Protein accession | YP_001413976 |
Protein GI | 154253152 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0257064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGACA ACCCCGAAGG TGAAGCCATC GAATGCGACG TGCCAGCGCG GCTAGACCGG CTGCCATGGG GACGCTTCCA TACGCTGGTT GTGGCCGCGC TCGGTATCAC GTGGATACTC GACGGATTGG AAGTGACGCT GGCGGGGGCT GTCGCCGGCG CGTTGCGGGA GAGCCCGTCG CTCGACATGA ACGCGTCGGA TATCGGGCTC GCCGCAAGCG CCTATCTTGT CGGCGCGGTT TTTGGAGGCG TCTTTTTCGG CTGGCTTACC GACAGGTTCG GACGGCGGAA ACTGTTTTTC ATCACGCTGG CGCTTTACGT TGCTGCGACA ATCGCCACGG CATTTTCCTG GAGCCTTGCG AGCTTCGCCT TTTTCCGATT TTTGACCGGG GCGGGGATCG GCGGCGAATA CACGGCAATC AATTCGACAA TCCAGGAACT CATTCCGGCG CGCTTCCGCG GGTGGACCGA TCTTGCGATC AATGGAAGCT TCTGGCTCGG TGCGGCGCTG GGTGCGGGGT TATCCATCGT CCTTCTCGAC CCGGACATTG CCGGTGGAGA CCTCGGTTGG CGGCTTTGCT TCTTCATTGG CGGCGTTCTC GGGCTTTTCA TTTTTGCGAT GCGGTTCTGG CTGCCGGAAA GCCCTCGCTG GCTGATGACG CATGGACGCG TCGCCGAGGC GAGCGGCATC CTCGCCGATA TCGAGGGGCA GTATCGCAGA CGGGGGCACG AGCTTGCCGA GGAAGGACTC GAATGCATAA AGCTGCGGCA GCACAGACCG CTGCGCGTTC GCGAGATTTT CCATACGCTG TTTCAGGTGC ATCGCCGCCG CGCGCTGGTT GGGCTGGCGC TCATGTCGGC ACAAGCCTTC TTCTACAATG CGATCTTCTT CACCTATGCG CTGGTGCTGA CGGATTTCTA CGATATTCCG GCGGCGCAGG TCGGCTGGTA CATCCTGCCC TTCGCGGCGG GGAATTTTTT CGGGCCGCTT ATTCTTGGGC GGCTGTTCGA CACGGTGGGG CGGCGGATCA TGATCGCATC CACTTACGCA ATATCGGGCG TATTGCTTGC CTGCAGTGGC TATATGTTCG CCGAAGGGCT GCTGACCGCG CAGACACAGA CGATTGCCTG GATGGTGATC TTCTTCTTCG CGTCAGCGGC GGCGAGCTCC GCCTATCTGA CAGTGAGCGA GACCTTTCCG CTGGAAATGC GCGCGGTGGC GATTGCCGTT TTCTACGCCG TTGGGACGGG GCTCGGCGGG GTGGCAGGGC CGGCGCTCTT CGGATGGCTG ATCGAATCCG GCTCGCGCGA CGCGGTGTTC GGCGGATACC TGGTGGGAGC AGGCTTCATG ACAGCCGCAG CAATCGTGCA GGCGATCTGG GGCGTTGCCG CGGAACGCCA GGCTCTCGAG ACAGTGACGA AGCCGCTGAG GGCGTGGGAC TGA
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Protein sequence | MRDNPEGEAI ECDVPARLDR LPWGRFHTLV VAALGITWIL DGLEVTLAGA VAGALRESPS LDMNASDIGL AASAYLVGAV FGGVFFGWLT DRFGRRKLFF ITLALYVAAT IATAFSWSLA SFAFFRFLTG AGIGGEYTAI NSTIQELIPA RFRGWTDLAI NGSFWLGAAL GAGLSIVLLD PDIAGGDLGW RLCFFIGGVL GLFIFAMRFW LPESPRWLMT HGRVAEASGI LADIEGQYRR RGHELAEEGL ECIKLRQHRP LRVREIFHTL FQVHRRRALV GLALMSAQAF FYNAIFFTYA LVLTDFYDIP AAQVGWYILP FAAGNFFGPL ILGRLFDTVG RRIMIASTYA ISGVLLACSG YMFAEGLLTA QTQTIAWMVI FFFASAAASS AYLTVSETFP LEMRAVAIAV FYAVGTGLGG VAGPALFGWL IESGSRDAVF GGYLVGAGFM TAAAIVQAIW GVAAERQALE TVTKPLRAWD
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