Gene Plav_2685 details

Gene Information

• Locus tag: Plav_2685
• ID: 5456346
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Parvibaculum lavamentivorans DS-1
• Kingdom: Bacteria
• Replicon accession: NC_009719
• Strand: +
• Start bp: 2885944
• End bp: 2886351
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640878262
• Product: histidine triad (HIT) protein
• Protein accession: YP_001413950
• Protein GI: 154253126
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.934104
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 63
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCATTCA CCCTTCACGA GCGGCTTGCC GCCGATACGC TGCTGGTGGC CGACCTGCCG 
CTTTGCCGGG TGCTGCTGAT GAATGACCGG CGGTTTCCCT GGCTGATCCT GGTGCCGCGG 
CGCGAGGGGC TGCGGGATTT CGATGATGTG GCGGCGAAGG AGAAAGCGAA ATTCCATGCG 
GAGATCGACC TTGCCTCGGA TGTGCTGAGG GAAGTGACCA AGGCACACAA AATGAATGTG 
GCGGCGCTCG GCAACATGGT GCCGCAGCTT CATGTGCATG TGATTGCCCG GTTTCCCGAG 
GATGCGGCCT GGCCGGCGCC GGTCTGGGGC GTTGGGACGG CCGAAGCCTA CGGCGAGGAA 
GAGAGGCGTG CCCTTGTCGA ACGGCTGGGA CGGGATTTTC GCGGCTGA 

 

Protein sequence

MAFTLHERLA ADTLLVADLP LCRVLLMNDR RFPWLILVPR REGLRDFDDV AAKEKAKFHA 
EIDLASDVLR EVTKAHKMNV AALGNMVPQL HVHVIARFPE DAAWPAPVWG VGTAEAYGEE 
ERRALVERLG RDFRG