| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2681 |
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| Symbol | |
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| ID | 5453510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2882420 |
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| End bp | 2883340 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878258 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001413946 |
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| Protein GI | 154253122 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.395032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCGA ACGTTCTGAT CGCCCTCCCG CTCGGCAAGG CTTTCGAGCG GAAGCTCACC
GACCGGTACA CCATCGTCGC CGATCCGCAG GCGCAGAAGG GCGTCGATGC TGTCGTCACT
GTCGGCACGA TGCGCGCCGA CGATGCCTGG TTCGACGCCA TGCCCGACCT GAAGCTCATC
TGCTGCTTCG GCTCCGGCTA TGAAGGGATC GATATCGGCG CGGCGGCCCG GCACAACGTC
ACCGTCACCA ATACCGTCGG CGCCAATGCC GCCACGGTCG CGGACCTCGC CGTCGCACTC
CTTCTCGCCT CGGTCCGCCT CGTCGTCACT GGCGACCGTC TCACCCGCGC CGGGCAATGG
CGCGGCGAAA ACCCTGCGCC CCTCCTCTTC GCGCGCGGCA TCACGGGCCG CCGGATCGGC
GTCGTCGGGC TCGGCGCCAT CGGCCTGAAG ATCGCGAACC GGCTCGCCGC CTTCGAAGCC
GAGATCGGTT ATCACAACCG CAGCAGGAAA GACGTCCCCT ATCCCTATTT CGAGACCGTG
CTCGAACTTG CCGAATGGGC CGACACACTC ATCCTCGCCC ACCGCGCCGA CGAGTCGAAC
CGTCACATGG TCAATGCCGG GGTTCTGGCG GCGCTCGGCC CTTCCGGTCA TGTCGTCAAT
ATCTCGCGCG GCTCCGCTAT CGACGAGGAC GCCCTGATTG CCGCCCTCAA AAACGGCACC
ATCGCGGGCG CCGGCCTCGA TGTTTTCGAG GACGAGCCCC ATCCGCGTCA GGATCTTGTC
ACCCTGCCCA ACGTGGTGGT GACGCCGCAT ATCGGCGGCG GAACCTCGGA AGCCATCATC
GCAATGGGCG ATGCCGTAAT CGCCAATCTC GACGCCTTTT TCGCCGGAAA ACCGCTTCCA
AACCCGGTCA CTTCGGCCTG A
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| Protein sequence | MKPNVLIALP LGKAFERKLT DRYTIVADPQ AQKGVDAVVT VGTMRADDAW FDAMPDLKLI
CCFGSGYEGI DIGAAARHNV TVTNTVGANA ATVADLAVAL LLASVRLVVT GDRLTRAGQW
RGENPAPLLF ARGITGRRIG VVGLGAIGLK IANRLAAFEA EIGYHNRSRK DVPYPYFETV
LELAEWADTL ILAHRADESN RHMVNAGVLA ALGPSGHVVN ISRGSAIDED ALIAALKNGT
IAGAGLDVFE DEPHPRQDLV TLPNVVVTPH IGGGTSEAII AMGDAVIANL DAFFAGKPLP
NPVTSA
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