| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2678 |
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| Symbol | |
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| ID | 5454690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2877544 |
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| End bp | 2878986 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878255 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001413943 |
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| Protein GI | 154253119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | [TIGR02466] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA ACTTGAGCAC TGAAACCGCC GCCGAGACCG CCCTTCCCGA CCGCTACAGC
GATGTCCTCA CCCTTCTGAA AGAGGGCCGC AAGCGCATCG CGGAGGAAAA GTGCCGCGCG
CTCCTGGCTG AAACGCCGGA AGACCCCGAT GCCCTGGCAC TGCTCGCCTC CATCGTCGTC
GAAAGCGGCA GGCTGGAAGA GGCGGAGCAA TTGCTCGGCT ACGCGCTGAA ACTTGCGCCC
ACCGAACCGA CCCCCTGGAT GAACCTCGGC CGCCTGTTGC AGCAGGCCGG CCGCTGGGGC
GACGCGATGG ACCATTACCA TCATGCCGCC ACCCTCTTCC CCGCTCACGC CGGCATCGCC
GCCACGCTCG GCCAGCTCTA TCAGCGCGCA AACCGTTTCA CGGACGCAGA AGCTCAGTAT
CGCCGCGCTC TGGAAAACCG GCCCATCCCC GCCTATCACA TGCAGCTCGG CATGGTTCTC
CTGCGGCAGG AACGCACCGA CGAAGCCGTC GAGGAACTGC AGACCGCAAT CAAGGGCAAC
CCGAACCTCG CCGCCGCCTA TGGCAATCTG GGCAATGCCG AGCAGAAGCG TGGAAACATC
GAGGCCGCCG CCGCCGCCTA CGAGAAAGCG GTCGCCCTCA ATCCAAAAGA CACGCTCTCA
TATGTCAGCT TCGGCATGGC GCGCCTCAAG CTCGGCGCCG CGCGCGAAGC CGCCGAAATC
TTCGAGCGTG CCCTCGCCAC CCATGGCCCG GAACGGCGCG CGGCGGCATG GCTTCCCTTC
GCCCGCGCGC AGGAATTCGG CGACATGCCG TCAGGCTACC GCGCTGAAAT CGGCAATCTC
GTCAGCCGCG CAACGCTGAC GCCACCCGAA GGCTATGCAA GCCTCGCCGA TCTCAACTCC
GCGCTCGCAA AAGCCCTGAA AGAAGATCCC ACCGTCACAT GGGAGCCGCT CGGAAAGGCG
ACCCGCAAGG GCGGCCAGAC CGGCCTCCTG CTCGACGCGC CGCGCGAGCC TTTCATTGCC
TTTGAGAAAT CCCTTCGCCG CGCCATCGAC GCCCATTTCG ACAGTATCAA GCCGCAGCCG
GGCCACCCAT ACCGGGGGCA AGTGCCAAAG ACCTACCATC TCGATCTCTG GGGCACGCTG
CTCTCCGAAG GCGGCCACCA GCATTCGCAT ATCCATGTCG GCGGCTGGAT GAGCGGCGTC
TATTATGTCG CCCTCCCGCC CGCCCTCGGC ACGGGCGAAG GCAGCCATGA CGGCTGGATT
GAATTCGGCC ATCCGCCACC GGAATTCGAT GCGAAGTTCG AACCGAAGAC GATTGCCTAT
GAGCCGCGAG AGGGCGACGC TCTCTTCTTC CCCTCATATC TCTTCCACCG CACGCTGCCC
TTCTCGGGCG ACGTGCAACG CATCAGCCTT GCCTTCGACG TGAAGCCGAC AAGCTGGCGC
TGA
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| Protein sequence | MDKNLSTETA AETALPDRYS DVLTLLKEGR KRIAEEKCRA LLAETPEDPD ALALLASIVV
ESGRLEEAEQ LLGYALKLAP TEPTPWMNLG RLLQQAGRWG DAMDHYHHAA TLFPAHAGIA
ATLGQLYQRA NRFTDAEAQY RRALENRPIP AYHMQLGMVL LRQERTDEAV EELQTAIKGN
PNLAAAYGNL GNAEQKRGNI EAAAAAYEKA VALNPKDTLS YVSFGMARLK LGAAREAAEI
FERALATHGP ERRAAAWLPF ARAQEFGDMP SGYRAEIGNL VSRATLTPPE GYASLADLNS
ALAKALKEDP TVTWEPLGKA TRKGGQTGLL LDAPREPFIA FEKSLRRAID AHFDSIKPQP
GHPYRGQVPK TYHLDLWGTL LSEGGHQHSH IHVGGWMSGV YYVALPPALG TGEGSHDGWI
EFGHPPPEFD AKFEPKTIAY EPREGDALFF PSYLFHRTLP FSGDVQRISL AFDVKPTSWR
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