Gene Plav_2664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2664 
Symbol 
ID5453373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand- 
Start bp2865179 
End bp2865847 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID640878241 
ProductGTP cyclohydrolase I 
Protein accessionYP_001413929 
Protein GI154253105 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0491858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGA AACCCCTAGA CGAGATTGGT CGAATGGACA TGAATGCTGC AGTTGATGGG 
CTCCGCGCCC AGCCGGATGA CGAGCGCCTG ACGCAAGTCG AGAAGCCGAG CCGCGAGGCG 
GCGGAAGCCG CCGTGCGCAC CCTCATCGCC TGGGCGGGCG ACAATCCGCA ACGTGAAGGC 
CTGATCGACA CCCCCGGCCG CGTCGTGCGC GCCTATGAGG AGTTCTTCGA GGGCTACAAC 
GAAGACCCCT ACAAGGAACT GACCCGCACC TTCGAGGAAG TCGAAGGCTA TAACGACATG 
GTCATGCTCC GCGACATCAA CATCGAGTCG CATTGCGAGC ATCACATGGT GGCCATTCTC 
GGCAAGGCAC ATGTCGCCTA TGTCCCGACC AAGAAGGTCG TCGGCATATC GAAGCTCGCC 
CGCGTCATCG AGATCTATTC CAAGCGCCTC CAGACGCAGG AGACGATGAC GGCCCAGATC 
GCGGAAACCA TCAATGCCGC GCTCCAGCCG CAAGGCGTCG CCATCCTCAT CGAGGCGAAG 
CATCAATGCA TGACGACGCG CGGCATCAAG AAGCCGGATG TCGCCACCAT CACCACGCAG 
TTCACCGGCG TCTTCCGCGA CGATCCCCGC ATGGAAAGCC GGTTCATGCA GATGATCCGC 
GGATACTGA
 
Protein sequence
MAGKPLDEIG RMDMNAAVDG LRAQPDDERL TQVEKPSREA AEAAVRTLIA WAGDNPQREG 
LIDTPGRVVR AYEEFFEGYN EDPYKELTRT FEEVEGYNDM VMLRDINIES HCEHHMVAIL 
GKAHVAYVPT KKVVGISKLA RVIEIYSKRL QTQETMTAQI AETINAALQP QGVAILIEAK 
HQCMTTRGIK KPDVATITTQ FTGVFRDDPR MESRFMQMIR GY