Gene Plav_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2652 
Symbol 
ID5456921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2855303 
End bp2855959 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID640878229 
ProductDSBA oxidoreductase 
Protein accessionYP_001413917 
Protein GI154253093 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.34917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGCGA CACTCCGCGC AGTGGAATTC AGACAGATGA AGTGGACGAA AGCCTTGGCT 
ACCCTCGAAT TTTTCTTCGA TTGCTCCAGT CCGTGGACCT ATCTCGCCTT CGCGCGAGTG
GAGGCGGTGG CCGAACGGAC GGGAGCCACA ATCGAATGGC GGCCGATCCT TGTCGGAGGG
GTCTTCAACG CGGTTAACGA AAGCGTTTAC GAAGCACGCG CCAACCCGCA CCCGGTGAAG
GGCCGCTACT ACGTCAAGGA CCTTAGGGAC TGGGCACGCT ATTGCGGCGT GGAGATCGGC
CAGCCGCCGG TCTTTCCGGT GCGGTCGGTG GATGCCATGC GGGCCGCCAT TGTGGCGCAG
GACGAGGGCA AGCTTCCGGC TTTTGCCTGG GCGACCTTTC GCAGCTATTG GGGCGAGCTG
AAGGACATCA GCCAGCCGGA AGTGCTGGAA GAGATCTGCA ATGAGGTGGG CCTCGACTGG
AACATGGTTA ACCAGCGCAT CAAGGAAGAG AATGTGAAGG GGCGGCTGCG GGCGAACACG
GAAGAGGTGA TCGCGCGGGG CGGGTTCGGT TCGCCGACGA TGTTCGTCAA TAAGACGGAT
ATGTATTTCG GCAATGACCG GCTGCCGCTC GTCGAGGCTG CGCTCGCCAA TGGCTGA
 
Protein sequence
MRATLRAVEF RQMKWTKALA TLEFFFDCSS PWTYLAFARV EAVAERTGAT IEWRPILVGG 
VFNAVNESVY EARANPHPVK GRYYVKDLRD WARYCGVEIG QPPVFPVRSV DAMRAAIVAQ
DEGKLPAFAW ATFRSYWGEL KDISQPEVLE EICNEVGLDW NMVNQRIKEE NVKGRLRANT
EEVIARGGFG SPTMFVNKTD MYFGNDRLPL VEAALANG