| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2642 |
|---|
| Symbol | |
|---|
| ID | 5454440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2846014 |
|---|
| End bp | 2846721 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640878219 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_001413907 |
|---|
| Protein GI | 154253083 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.627312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.778271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAT CTATTCTTTC CACCGTCATC GAAAACGATA TCGCTATTCT GACCATGGAT
GATGGCCGCG CCAACGCGCT CGGCTTTGCC ATGATCGGCG AGATCAACGC CGCGCTTGAC
CGCGCCGAGA ACGAAGCGAA AGCCGTGCTG ATTGCCGGCC GGGAGAAGCG CTTTTGCGCC
GGCTTCGACC TTGAGGTCAT GGCTTCTGGC CCCGACAATG TGCGCAAGCT CGTCACTGCG
GGTGCCGAAC TTCTCATGCG CCTCTACGAA TTCCGCCTGC CCGTCGTCAT CGCCTGTACC
GGACATGCCC TCGCTGCGGG CGGCTTGCTG CTGCTTGCCG CCGATAGCCG CCTCGGCGCA
GAGGGTGATT TCAAGATTGG CCTGCCGGAA GTGGCCATCG GCATGACCAT GCCGGTGTTT
GGCCTCGAGC TCGCGCGGGA CCGGTTGGCA CGGAACCGGC TGACGGAGGC CGTCACCCAG
GCTCGCATCT ACGCTCCCGC CGAAGCTGTC GCTGTGGGCT ACCTGGATGA GACCGCGCCC
CTCGCCACGC TGATCGAAGC GGCAAAGACT CGCGCCGCCG CCCTCGCCGC CCTTTCCCAA
CCCGCCTTCG CGAATACGAA GCGGAAGGAA AGGTTCTTAA CCATTAAAGG CGTGCGTGAG
ACACTGAATG CGGATTCGGA GACATTCAAC GGCGCAAACC CCTCCTGA
|
|---|
| Protein sequence | MTGSILSTVI ENDIAILTMD DGRANALGFA MIGEINAALD RAENEAKAVL IAGREKRFCA
GFDLEVMASG PDNVRKLVTA GAELLMRLYE FRLPVVIACT GHALAAGGLL LLAADSRLGA
EGDFKIGLPE VAIGMTMPVF GLELARDRLA RNRLTEAVTQ ARIYAPAEAV AVGYLDETAP
LATLIEAAKT RAAALAALSQ PAFANTKRKE RFLTIKGVRE TLNADSETFN GANPS
|
|---|
| |