Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2615 |
Symbol | |
ID | 5455761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2822375 |
End bp | 2823121 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640878192 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001413880 |
Protein GI | 154253056 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.989556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.03074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATT TCGAATCCGA CGGGTTGAGG CTGGCCTATT TCGCGGAGGG CGAGGGGACG CCGATCGTGC TGGCGCACGG GTTTGCCTCG ACGCATCGGG TGAACTGGAT CGCGACGGGG TGGAGCCGGG CGCTGATGGA GGCGGGGTTT CGCGTCATCA TGCCGGACAT GCGGGGACAT GGGGAGAGCG ACAAGCCGCA TGATGCGGAG GACTACACAC TCTCCGCGAT GGCGGCGGAT CTTGTGGCGC TGCTCGATCA TCTGGGCGAG CCGGGCGCGG ACCTTATGGG CTATTCGATG GGGGCGATGG TGGCGCTGGT CGCGGCGACG GAATGGCCGG ACCGGTTCGA CCGGGTGATC GCGGCGGGCG TGGGCGCGCG GCTGCTCGCG GCGGACCGCG ACCCGAGGCC GGTGATCGAG GCGCTGCTGG CGGACGACCC CGCAAGCGTG GAGGACGCGG GCGCGCGGAT GTTCCGTGTG TTCGCGGATC AGAACGGGCA GGACCGCGCG GCGCTTGCGG CCTGTTTCGA GGCGGTGCGG GCACCCTTTC CGGCGGAGGG GCTTTCGCGG ATTTCGCGGC CGGTGCTGGT GGTGGCGGGG GAGACGGACA GCCAAGCAGG CGCGGCGGGG GTGCTTGCGG CGCGGATACC GAATGCGCGC GGCTTCACGG TGCCCAAGCG CGACCACATG AAGACGGTGG GCGACCGCGC CTACAAAGAA GCGGTGCTGA AGTTTCTGGA GGGGTGA
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Protein sequence | MDYFESDGLR LAYFAEGEGT PIVLAHGFAS THRVNWIATG WSRALMEAGF RVIMPDMRGH GESDKPHDAE DYTLSAMAAD LVALLDHLGE PGADLMGYSM GAMVALVAAT EWPDRFDRVI AAGVGARLLA ADRDPRPVIE ALLADDPASV EDAGARMFRV FADQNGQDRA ALAACFEAVR APFPAEGLSR ISRPVLVVAG ETDSQAGAAG VLAARIPNAR GFTVPKRDHM KTVGDRAYKE AVLKFLEG
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