Gene Plav_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2615 
Symbol 
ID5455761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2822375 
End bp2823121 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID640878192 
Productalpha/beta hydrolase fold 
Protein accessionYP_001413880 
Protein GI154253056 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.989556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.03074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATT TCGAATCCGA CGGGTTGAGG CTGGCCTATT TCGCGGAGGG CGAGGGGACG 
CCGATCGTGC TGGCGCACGG GTTTGCCTCG ACGCATCGGG TGAACTGGAT CGCGACGGGG
TGGAGCCGGG CGCTGATGGA GGCGGGGTTT CGCGTCATCA TGCCGGACAT GCGGGGACAT
GGGGAGAGCG ACAAGCCGCA TGATGCGGAG GACTACACAC TCTCCGCGAT GGCGGCGGAT
CTTGTGGCGC TGCTCGATCA TCTGGGCGAG CCGGGCGCGG ACCTTATGGG CTATTCGATG
GGGGCGATGG TGGCGCTGGT CGCGGCGACG GAATGGCCGG ACCGGTTCGA CCGGGTGATC
GCGGCGGGCG TGGGCGCGCG GCTGCTCGCG GCGGACCGCG ACCCGAGGCC GGTGATCGAG
GCGCTGCTGG CGGACGACCC CGCAAGCGTG GAGGACGCGG GCGCGCGGAT GTTCCGTGTG
TTCGCGGATC AGAACGGGCA GGACCGCGCG GCGCTTGCGG CCTGTTTCGA GGCGGTGCGG
GCACCCTTTC CGGCGGAGGG GCTTTCGCGG ATTTCGCGGC CGGTGCTGGT GGTGGCGGGG
GAGACGGACA GCCAAGCAGG CGCGGCGGGG GTGCTTGCGG CGCGGATACC GAATGCGCGC
GGCTTCACGG TGCCCAAGCG CGACCACATG AAGACGGTGG GCGACCGCGC CTACAAAGAA
GCGGTGCTGA AGTTTCTGGA GGGGTGA
 
Protein sequence
MDYFESDGLR LAYFAEGEGT PIVLAHGFAS THRVNWIATG WSRALMEAGF RVIMPDMRGH 
GESDKPHDAE DYTLSAMAAD LVALLDHLGE PGADLMGYSM GAMVALVAAT EWPDRFDRVI
AAGVGARLLA ADRDPRPVIE ALLADDPASV EDAGARMFRV FADQNGQDRA ALAACFEAVR
APFPAEGLSR ISRPVLVVAG ETDSQAGAAG VLAARIPNAR GFTVPKRDHM KTVGDRAYKE
AVLKFLEG