| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2611 |
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| Symbol | |
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| ID | 5454645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2817436 |
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| End bp | 2818878 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878188 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001413876 |
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| Protein GI | 154253052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.803344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0185611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG CGGCCTCGAA GGGCCCTGCC GATGCGCGCG GCGCACAGGG GCCCCTTTCG
CGCTGGACGC TGTTTGCCTT TGCGCTGCCG GCGGCGCCGA TTTCGGCCAT GGGGCTGCCG
CTGGTGGTTC ACCTGCCGCC CTTCTATGCG GGTTCGCTGG GGCTGGGGCT GACGGTTGTC
GGCACCATCT TCATGCTGGC GCGCTTCTGG GACGTGTTCA CCGACCCGGT GCTCGGCATT
CTTTCCGACA AGTTCGAGAC GCGCTGGGGC AGGCGGCGGC ACTGGATCGT GCTGTCGGTG
CCGATCATGC TGCTCTCCGT CTACATGATC TTCATGCCGC CCGTCGCGGT GACGGCCTTC
TATCTCATCT TCTGGCTCTT CGTTCTTTAT GTCGGCTGGA CGCTGCTCAC CATCTCGCAC
ATGAGCTGGG GCGCGGAGCT GACGCCGGAC TATCACGAAC GCTCGCGCGT GCAGGGCGCA
CGCGAAGTGG CGCTTGTTCT CGGCATGGTG CTGGTGCTGA CGCTGCCTGT GCTGATCGAG
CAGACGAACC CGGAAAACCT GGCGGCGGCG CGCGTCGCCT CCATGGGCTG GTTTGTGCTG
ATATTGCTGC CGATCGCTGT CGGCCTTGCC GTGTGGAAGG TGCCGGAGCG GCCGACGACG
GCGCCGGCGC ATGTGCCGAT GCGGCAGGCG ATCCGCGCGC TGGTGCAGAG CCGGCCTCTG
CAGGTGGTGC TGGCGGCCGA TCTTCTCGGC GGCGTGTCGG GCGGGCTTGT GGCGTCGATG
TTCCTCTTCC TTGCGGAGGA CGCGCTGAAG CTCGGGCAAT ATTCGAGCCT GATGCTGCTC
GGCTATTTCA TTTCCGGCGT CTGCTTCATT CCGCTCATCC TGGCGGTGAG CCGGCGGCTC
GGCAAACACA AGACGGCGGC CGCATCGGCG GTGTTCAACG CGCTGACCGT GCCGCTCATC
CTGCTGGTGC CGCAGGGCAA TGCGATGATG GCGCTTGGCG TCTGGGTGCT GTGCGGCGTC
AACATGGCGG CGGGGCCGTT CCTGTTCCGC TCGCTGATGG CGGATGTGGC GGATCATGAC
ACGGTGATCA CGCGGCAGCA GCGGACGGGG CTGTTCTATT CGCTGCTGAC CTCGACCAGC
AAGGTGGGCG CGGCCTTCGC GATCTTCATC GCCTATTCGC TGCTCGACTC AATCGGCTTT
CAGGCGGGCG GCGAGAACTC GCAATCCGTG CTCGACAGCC TGCGGGCGGT TTACGTCTGG
CCGGCCTGCA TCATCAGCGC GGCGGTGGCG GGCATTCTCT GGTTCTATCC GATCGACGAG
AAGCAGCAGG TGGAGAACCG CCGCATCCTC GAAATGCGCG GCATCGAAGC GGCGGCGACC
GCCGTTGCCA TGCGGACGGG GCATCCCTCC GACGCGCAAT CCTCCGGCAT TCCGGCGGAC
TGA
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| Protein sequence | MTNAASKGPA DARGAQGPLS RWTLFAFALP AAPISAMGLP LVVHLPPFYA GSLGLGLTVV
GTIFMLARFW DVFTDPVLGI LSDKFETRWG RRRHWIVLSV PIMLLSVYMI FMPPVAVTAF
YLIFWLFVLY VGWTLLTISH MSWGAELTPD YHERSRVQGA REVALVLGMV LVLTLPVLIE
QTNPENLAAA RVASMGWFVL ILLPIAVGLA VWKVPERPTT APAHVPMRQA IRALVQSRPL
QVVLAADLLG GVSGGLVASM FLFLAEDALK LGQYSSLMLL GYFISGVCFI PLILAVSRRL
GKHKTAAASA VFNALTVPLI LLVPQGNAMM ALGVWVLCGV NMAAGPFLFR SLMADVADHD
TVITRQQRTG LFYSLLTSTS KVGAAFAIFI AYSLLDSIGF QAGGENSQSV LDSLRAVYVW
PACIISAAVA GILWFYPIDE KQQVENRRIL EMRGIEAAAT AVAMRTGHPS DAQSSGIPAD
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