| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2599 |
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| Symbol | |
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| ID | 5454357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2802319 |
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| End bp | 2803011 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878175 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001413864 |
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| Protein GI | 154253040 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.129734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.187954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAGCG GCGCCGCCGA CGCCAAGCCG CATTATGCCG GACATCGCGA AAGACTCCGC
GAGCGCTTCC TGAAATCGCC GGAAACGCTG CCCGATTACG AACTCCTCGA ACTCGTCCTC
TTCCGCGCCG TGCCGCGCCG CGATGTGAAG CCGCTCGCCA AGGAACTGAT CGCACGCTTC
GGCGGCTTCT CCGAGGTGAT CAATGCGGAA CCTTCGCGTC TGCGCGAAAC GAAAGGTGTG
TCCGACGCCA TCGTGACGGA ATTCCGTATC GCGCGCGAAA CTGGTTTGCG GCTCGCGCAG
GCGAAGGTGA TGAAGAAGGA AGTGCTCGGC TCATGGGCGG CACTTCTGGA TTATTGCTCC
GCGTCCATGG CGCACAACCC GACCGAACAA TTCCGCATCC TCTTTCTCGA CCGCAAGAAT
GTTCTGATCG CGGACGAAGT GCAGCAGAAG GGAACGGTCG ATCACACACC GGTCTATCCG
CGCGAAGTCG TCAAACGCGC ACTCGAACTC AACGCCTCCG CCCTCATCCT TGTGCACAAC
CATCCCTCAG GCGACCCGAC GCCCTCCACC GCCGATGTCG AGATGACGCG ACAGATCGTC
AATACGGCAA AGCCGCTCGG CATCGAGGTG CATGACCACC TCGTCGTCGG CAAGGGACGG
CACGCGAGTT TCAGGACTTT GGGACTGATC TGA
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| Protein sequence | MDSGAADAKP HYAGHRERLR ERFLKSPETL PDYELLELVL FRAVPRRDVK PLAKELIARF
GGFSEVINAE PSRLRETKGV SDAIVTEFRI ARETGLRLAQ AKVMKKEVLG SWAALLDYCS
ASMAHNPTEQ FRILFLDRKN VLIADEVQQK GTVDHTPVYP REVVKRALEL NASALILVHN
HPSGDPTPST ADVEMTRQIV NTAKPLGIEV HDHLVVGKGR HASFRTLGLI
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