| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2598 |
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| Symbol | |
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| ID | 5454126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2800308 |
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| End bp | 2801732 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878174 |
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| Product | amidase |
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| Protein accession | YP_001413863 |
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| Protein GI | 154253039 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.468193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.210998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCA ATCTGAAGGG CGCGAAGCCG GTCATGCCGG AACTCGCAAA GCTCGACGCG
ACCGCGCAGG CCGAACTGGT GCGCAAGGGC GAGTTGACGG CGCTGGAGCT GGTGGAAGCC
GGCATTTCGC GCATCGAACA GGTCAATCCG CAGGTCAACG CCGTGGTGGA GACATTCTAC
GACCGGGCGC GCGAAGCGGC CAAGGGCAAG CTGCCCGAGG GGCCTTTCAC CGGCGTCCCG
AACCTCGTGA AGGATCTCGA CAATCTGAAA GGCACGCGCG CCACCTCCGG TTCGCGCTTT
CTCGCGCAGA ATATCTCGCC GGAAACCGAT CCCATCATCG CGGGCAAGGA GAAGTCCGGC
TTCGTCATGG TCGGCAAGAG CAACACGCCG GAATTCGGCC TGCTCGGCAC GACGGAATCG
CTGCTGCTCG GCGCCTGCAA CAATCCATGG AACCTCGCGC ATTCGCCGGG CGGTTCGTCG
GGCGGCGCGG CGGCGGCGGT CGCTTCCGGC ATGGTGCCTG TCGCCCATGC AACGGATGGC
GGCGGTTCGA TCCGCATTCC CGCCTCCTGT TGCGGCGTTT TCGGGCTGAA GCCGAGCCGT
GGCCGCATCT ATCTCGGCGA GCGCCAATTG CCGGGCGATA TCGGTTTCCA GCATTGCGTC
AGCCGTTCGG TTCGCGACAG TGCGACGCTG CTCTCGCTCA CCGAGCTCAC GGGCAAGGAT
GCCGTGCTGC CGCCGGTCGG CCGTGTCGAA GGTCCGGGCA AGAAGCGCCT CAGGATCGCT
TTCGGCACCA TGGACTACAA GGGCCGGGAG CCCGCGCCGG ATGTGAAGGC GGCACTCGAA
GATGTCGCGC AGCTTTGCGC CGATCTCGGT CACGAGATTG TCCCCGCCCA GAACCGGATC
GACGGTCCTG CCTTCGAAGA TGCCTTCCTC GCGGCCTGGG CGTCGGGCCC GGCGGAGCTT
GTCGCGCTCG TGAAGCAGAT GGGCCTCGAT CCTGAAGCCG TGCTTGAGCC CTGGACCCTC
GGCCTTGCCG AACTCTTCAA CAGCAAGCCC GCCGGCACGC TGGAAAAGTC GCTCGCCCAT
TTTGCGAAAG TCACGGCGCA GACCGAAGCC TTCATGGCGG ATTACGATGT CTGGCTGACA
CCGGTGCTGG CCACGGTGCC GCCGAAGACC GGCGAGCAGG CGCCCACCGT GCCTTTCGAC
ACGCTTTATG AGCGCGTCTT CAACTACGTC ACCTACACGC CGCTCCACAA TGTGGTGGGC
ACGCCCGCCA TGTCCGTGCC GCTGTCGTGG AACAAGGCCG GCCTTCCCAT CGGCTCGCAA
TTCGCTGCGC TGCCCGGGCA GGAAAAAGTC CTCCTCGAAC TCGCCTTCGA ACTGGAGCAA
GCCCGTCCGT GGGCGGACAA AATGCCGCCG GTCTTCGCCG GGTAG
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| Protein sequence | MDSNLKGAKP VMPELAKLDA TAQAELVRKG ELTALELVEA GISRIEQVNP QVNAVVETFY
DRAREAAKGK LPEGPFTGVP NLVKDLDNLK GTRATSGSRF LAQNISPETD PIIAGKEKSG
FVMVGKSNTP EFGLLGTTES LLLGACNNPW NLAHSPGGSS GGAAAAVASG MVPVAHATDG
GGSIRIPASC CGVFGLKPSR GRIYLGERQL PGDIGFQHCV SRSVRDSATL LSLTELTGKD
AVLPPVGRVE GPGKKRLRIA FGTMDYKGRE PAPDVKAALE DVAQLCADLG HEIVPAQNRI
DGPAFEDAFL AAWASGPAEL VALVKQMGLD PEAVLEPWTL GLAELFNSKP AGTLEKSLAH
FAKVTAQTEA FMADYDVWLT PVLATVPPKT GEQAPTVPFD TLYERVFNYV TYTPLHNVVG
TPAMSVPLSW NKAGLPIGSQ FAALPGQEKV LLELAFELEQ ARPWADKMPP VFAG
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