| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2593 |
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| Symbol | |
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| ID | 5454590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2795371 |
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| End bp | 2797290 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640878169 |
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| Product | quinoprotein glucose dehydrogenase |
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| Protein accession | YP_001413858 |
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| Protein GI | 154253034 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.238471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0735284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT TCGCGTTTTT CCTGTTGTCC ATCCTGTTGA TGTCGTTGCC CGCGCAGGCT
GCGGGCTGGA GTCATTATGG CGGCGATGCG GGCGGGCAGC GCCATTCGGC CTCGGCGCAG
ATCACCCCGG CGAATGTGGG CAATCTCGCG CCCGCATGGA CCTACTCCAC GGGCGACCTG
ACGGCGCGCG CTGACGACAT GAAGAGCAGC GCCTTCGAGG GCACGCCGGT TCTCGTCGCA
GGCTCGCTCA TCTTCTGCTC GCCCTTCAAC GAGGTAATTG CGCTCGATCC CGGCACGGGT
GCCGAGAAGT GGCGCTACGA CCCGAAGGTT ACGACCGGCT ACCGGCCGGG CAACCAGTTC
ATCTGCCGGG GCGTCACGCC CTGGGTGGAT GCGGCGGCGG GGGAGGGCGA CCTCTGCGCC
ACCAGGCTGT TCATGGGTAC GGTCGACAGC CGCCTCATCG CGCTCGATGC GGGGACAGGC
CAGCCCTGCC TTGGTTTCGG CATGGATGGC GAAGTCCGTA TCGATCCCGG CATGGATCTC
CAATGGCCCG GCGAATTCCA GATCACGTCG CCACCCGCCG TTGCGGATGG CGTCGTCGTC
ATCGGCTCCG CCATCAGCGA CAATCGCCGC GTCGATGCGC CGAAGGGCAC CGTCCGCGCC
TTCGATGCGC GCACGGGCAA GCCGCTCTGG GATTTCAATC CGGTGACACG CGGCGCGAAG
GATCATCCCG AGGATTGGCC GCGCGGCGTC GCGGAACATA CAGGCCATGC CAATGTCTGG
GCGCCGATGT CGGCGGACGA GACGCGCGGG CTTTTCTTCC TGCCGACATC ATCGCCGAGC
CCCGATTTCT TCGGCGGCGA GCGTTCCGGC GACAACCGCT ATGCGAATTC CGTCGTCGCG
CTCGATGCGC GCACCGGCGA TGTCCGCTGG CACTTCCAGA CCGTGCATCA CGATGTCTGG
GATTACGATC TGCCGGCGCA GCCGAGCCTC GTCACGCTGA CGCGCGAAGG CAAGCCACTC
GATGCCGTGG TGCAGGTGAC GAAGACGGGC TTCGTCTTCG TGCTCGACCG CGATACGGGC
AAGCCGATCT TCGAAGTGGA AGAGCGTCCC GTGCCGCAGG GCGGCGCGGC GGGCGAGTTT
CTCTCGCCGA CGCAGCCTTT CCCCGTCGCG CCGCCGCCGC TGGTGCCGCA AACGCTGTCG
CCGGACGATG CCTGGGGCCT CACTTACTGG GACCGCAAGG CCTGCCGCGA AAAGATCGCC
GGCGCGCGCT CCGAAGGTCT CTACACGCCG CCGAGCCCTC AAGGCACGAT CATGTATCCC
TTCACCGGTG GTGGCGCTAA CTGGGGCGGC ATGGCGTTCG ATCCGAAAAG CCAGCTCATG
TACATCAACA CGAGCCGCGC CGCGCATCTC ATCACGCTGA TCCCGTCGGA AGATTTCGCC
GCCGCGAAGG CGGCCGAGCC GAACGAGGAA ATCTCGCCGC AGGCGCCGAC GCGCTGGGCG
GTGAAGCGCG AGCTTGTGCT CTCGCCGCTC GATCTCCCCT GCAATCCGCC GCCCTGGGGC
ATGTTGACGG CGGTCGATCT TTCCGACGGC ACCATCGCAT GGGAAAGCGT GCTCGGCACT
GTGCGCGACC TCGCGCCCGT GCCCCTGCCG TGGAAACTCG GCACGCCGAA TTTCGGCGGA
CCCATCGTCA CGGCGGGCGG CGTCGTCTTC ATCGGCGCGG CGATGGACGA TTACCTGCGT
GCCTTCGATG CGGCGTCAGG CGAGGAACTC TGGAAAGGTC GTCTCCCCGC GGGCGGGCAG
GCCACGCCCA TGACCTATGA ATGGGAAGGC CGCCAATATG TCGTCATCGC CGCCGGCGGC
CATGCTCGCG CGACGACGAG GCTCGGCGAC TCCGTCGTCG CCTTCGCGCT GCCGGAGTGA
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| Protein sequence | MTRFAFFLLS ILLMSLPAQA AGWSHYGGDA GGQRHSASAQ ITPANVGNLA PAWTYSTGDL
TARADDMKSS AFEGTPVLVA GSLIFCSPFN EVIALDPGTG AEKWRYDPKV TTGYRPGNQF
ICRGVTPWVD AAAGEGDLCA TRLFMGTVDS RLIALDAGTG QPCLGFGMDG EVRIDPGMDL
QWPGEFQITS PPAVADGVVV IGSAISDNRR VDAPKGTVRA FDARTGKPLW DFNPVTRGAK
DHPEDWPRGV AEHTGHANVW APMSADETRG LFFLPTSSPS PDFFGGERSG DNRYANSVVA
LDARTGDVRW HFQTVHHDVW DYDLPAQPSL VTLTREGKPL DAVVQVTKTG FVFVLDRDTG
KPIFEVEERP VPQGGAAGEF LSPTQPFPVA PPPLVPQTLS PDDAWGLTYW DRKACREKIA
GARSEGLYTP PSPQGTIMYP FTGGGANWGG MAFDPKSQLM YINTSRAAHL ITLIPSEDFA
AAKAAEPNEE ISPQAPTRWA VKRELVLSPL DLPCNPPPWG MLTAVDLSDG TIAWESVLGT
VRDLAPVPLP WKLGTPNFGG PIVTAGGVVF IGAAMDDYLR AFDAASGEEL WKGRLPAGGQ
ATPMTYEWEG RQYVVIAAGG HARATTRLGD SVVAFALPE
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