Gene Plav_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2588 
Symbol 
ID5456482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2792255 
End bp2792500 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content59% 
IMG OID640878164 
Productphosphoribosylformylglycinamidine synthase, purS 
Protein accessionYP_001413853 
Protein GI154253029 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1828] Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 
TIGRFAM ID[TIGR00302] phosphoribosylformylglycinamidine synthase, purS protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.285669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.151306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC GTATCAAGGT CACGCTCAAG AACGGTGTTC TCGACCCGCA GGGTAAGGCG 
ATCGAGGGGG CGCTCGGCTC GCTCGGTTTC TCCGGCGTCG AAAGCGTGCG GCAGGGAAAA
TACATCGAGG TCGAACTGGC CGAGACCGAC CGCAAGAAGG CCGAAGCCGC CATTGACGAG
ATGTGCAAGA AGCTTCTCGC CAATACCGTC ATCGAAAACT ACGCGATCGA GCTGGACGAG
AAGTGA
 
Protein sequence
MKARIKVTLK NGVLDPQGKA IEGALGSLGF SGVESVRQGK YIEVELAETD RKKAEAAIDE 
MCKKLLANTV IENYAIELDE K