Gene Plav_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2587 
Symbol 
ID5453746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2791584 
End bp2792252 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content62% 
IMG OID640878163 
Productphosphoribosylformylglycinamidine synthase I 
Protein accessionYP_001413852 
Protein GI154253028 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01737] phosphoribosylformylglycinamidine synthase I 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.446689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.175392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTT CCGTCGTCGT CTTCCCCGGC TCGAACCGCG AGCGCGACAT GATGTACGCG 
CTTGAAACCA TCACCGGCAG CAAACCGACC GCCGTCTGGC ATGCGGACCG GGAACTTCCC
GAGACGGACC TCGTGGTCCT GTGCGGCGGC TTTTCCTATG GCGACTATCT GCGCACCGGC
GCCATTGCCG CACGCGGCAA CATCATGCCC GCCGTGGCGA AGGCAGCGGA CAGGGGCGTA
CGCATACTCG GCGTCTGCAA CGGCTTCCAG ATTCTCTGCG AAGCGGGACT TCTGCCCGGC
GTGCTGATGC GCAATGCCGC TCTCAAATTC GTCTGCAAGC ATGTCGATCT AGAAGTTGCG
AATGCCGATA CGGACTTCAC GCGCAAATAC GAAGCCGGTC AGGTGTGGCG CTGCCCGGTC
GCGCATGGCG ACGGCAACTA CTTTGCGGAT AGCGAGACGC TGAAGCGCCT CGAAGGCGAA
GGCCGCGTCG GCCTGCGCTA TGCGCGCGGC ACCAACCCGA ACGGTTCGCT GAACGACATT
GCCGGCATTC TCAACGAGCG CGGCAATGTG TTCGGCCTGA TGCCCCACCC TGAAAACATG
ATCGAACCGT TGAACGGCGC GACCGACGGA CGCGCTCTCT TTGAAAGCGT GCTGGAGGCT
GTGGCGTGA
 
Protein sequence
MKSSVVVFPG SNRERDMMYA LETITGSKPT AVWHADRELP ETDLVVLCGG FSYGDYLRTG 
AIAARGNIMP AVAKAADRGV RILGVCNGFQ ILCEAGLLPG VLMRNAALKF VCKHVDLEVA
NADTDFTRKY EAGQVWRCPV AHGDGNYFAD SETLKRLEGE GRVGLRYARG TNPNGSLNDI
AGILNERGNV FGLMPHPENM IEPLNGATDG RALFESVLEA VA