Gene Plav_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2573 
Symbol 
ID5455022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2773567 
End bp2773830 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content58% 
IMG OID640878150 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_001413839 
Protein GI154253015 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0606725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC CTGAAGTTCT CGATCTCGCG CGACAGGCGA TTTACGTGCA GTTGATCGTG 
TCGGCGCCGA TGATGGCGGT AGCGTTGCTG GTGGGTCTTG CCATTGCGCT CTTGCAGGCG
CTGACGCAGG TGCAGGAAAT GACGCTCGTT TTCGTGCCCA AGATCGTCGC GATCTTTCTT
ACCATGCTGA TATCCCTGCC ATTCATGGCG CAGGCTCTTT CCGGCTTCAT GACCCTGGTC
GCCCAGAAGA TCGTTACGGG CTGA
 
Protein sequence
MSGPEVLDLA RQAIYVQLIV SAPMMAVALL VGLAIALLQA LTQVQEMTLV FVPKIVAIFL 
TMLISLPFMA QALSGFMTLV AQKIVTG