Gene Plav_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2563 
Symbol 
ID5453885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2764470 
End bp2764973 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID640878140 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_001413829 
Protein GI154253005 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.549847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG TCGACGCTGA CATCTCCGAA GACGAGGAAG ACGCCTCCGC ACCGCCGGCG 
AAGCGCCGGC TCGCGGGCAA GGTGCTGGTG CTCTATGTCG TGCTGCCGGT TCTGCTTCTG
GTGGGCGCGG GCGTGGGCGT CTACATGTCC GGCATTCTGG GCGGCACTTC CGAAGAGGAA
CATGCGGTCG TGGCCGCACC CGCACCTGTC TTTTACGATC TCCCCGACTT TCTCGTAAAT
CTCAGCGGGC CGCCGCCGCA ACATTACCTG AAGCTTCGCG TCGCACTCGA AGTGCCGAGC
AAGGAAACCG TTGCGCGTCT CGAAGCGGAG ATGCCGCGCG TGCTCGACGG TTTTCAGACA
TTCCTGCGCG AGTTGCGCCC GGAAGATCTC GAAGGATCGC AGGGCATGCT CAACCTCAAG
GAAGAGCTCA TGCGCCGCCT GGCGCTCGCC ACGCAGGAGC CGCTGGTGAC GGACGTGCTC
TTCAAGGAAA TCATCGTTCA ATAA
 
Protein sequence
MAAVDADISE DEEDASAPPA KRRLAGKVLV LYVVLPVLLL VGAGVGVYMS GILGGTSEEE 
HAVVAAPAPV FYDLPDFLVN LSGPPPQHYL KLRVALEVPS KETVARLEAE MPRVLDGFQT
FLRELRPEDL EGSQGMLNLK EELMRRLALA TQEPLVTDVL FKEIIVQ