Gene Plav_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2561 
SymbolflgG 
ID5455388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2762582 
End bp2763367 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID640878138 
Productflagellar basal body rod protein FlgG 
Protein accessionYP_001413827 
Protein GI154253003 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.279353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCGC TCAGCATCGC CGCCACAGGC ATGATGGCCC AGCAGCTCAA TGTCGAGGTG 
ATCTCGAACA ACATCGCCAA CATGAGCACC ACCGGCTTCA AGCGCGGCCG CGCCGAATTC
CAGGATCTGC TCTATCAGAA CCTGCGGCGC GTCGGCGCGA ACTCGTCGGA TGCGGGCACC
ATCGTCCCCT CCGGCGTGCA GGTCGGCCTC GGCGTCAAGA CGGCTGCGGT CAACCGCATC
ATGACCCAGG GCAACATGAA CAACACGGAA AACAAGCTCG ACGTCGCCAT TCAGGGCCGC
GGCTATTTCC GCATCGAATT GCCGAGCGGC GACGACGCCT ATACCCGCGC CGGCACCTTC
GACATCGGCC CCGACGGACA GCTCATCACC GCCGACGGCT ATACGCTCGC CCCCGGCATC
ACCATTCCGC CGGAGGCGAC CGACATTGCC ATCAGCGCCG ACGGCCAGGT GCAGGTCGCC
ATTCCCGGCC AGACCGCGCC GCAGATCGTC GGCCAGATGG AACTCGTCGC CTTCGCCAAT
GAAGGCGGCC TCGATCCTCT CGGCGGCAAT CTCTTCGCGG AAACGCCTGC CAGCGGCGCG
CCGACCATCG GCACACCCGG CAATGACGGT CTCGGCAGCG TGCTTCAGGG TTTCCTCGAA
ACCTCGAACG TGAACGCGGT CAGCGAAATC ACCTCGCTCA TCACCGCCCA GCGTGCATAT
GAGATGAATG CCAAGATCAT CACCGCCTCG GACGAGATGA TGTCCGTCAC CTCGAACATG
AAATAA
 
Protein sequence
MQSLSIAATG MMAQQLNVEV ISNNIANMST TGFKRGRAEF QDLLYQNLRR VGANSSDAGT 
IVPSGVQVGL GVKTAAVNRI MTQGNMNNTE NKLDVAIQGR GYFRIELPSG DDAYTRAGTF
DIGPDGQLIT ADGYTLAPGI TIPPEATDIA ISADGQVQVA IPGQTAPQIV GQMELVAFAN
EGGLDPLGGN LFAETPASGA PTIGTPGNDG LGSVLQGFLE TSNVNAVSEI TSLITAQRAY
EMNAKIITAS DEMMSVTSNM K