Gene Plav_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2555 
Symbol 
ID5455121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2758017 
End bp2758346 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content64% 
IMG OID640878132 
Producthypothetical protein 
Protein accessionYP_001413821 
Protein GI154252997 
COG category[M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3951] Rod binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.818029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCC TCTCCGTCTT CCCCGCCTTC ATCCACACGC CCGCGCAGCC TTCCGTCCAT 
ACCGGAAAGC CCGCCGCGAA GGATGAGGCG CGCGACGCCC GCATCTGGGA AACCGCGCAG
GATTTCGAAG CCCAGTTTGT CTCCACGCTC TTCCAGTCGA TGTATGAAGG CGTCGGCGAG
GACGATCCCT TCAGCGGCGG CCCGGGCGAA ACCATGTTCC GCTCCATGCT CGTCGATCAG
TACGGCCGCC AGATGGCCCA ATCGGGCGGC ATCGGCATCG CCGACGCCGT CTACCGCGAA
ATGCTGCAAA TGCAGGAGGT GCAGAAATGA
 
Protein sequence
MEALSVFPAF IHTPAQPSVH TGKPAAKDEA RDARIWETAQ DFEAQFVSTL FQSMYEGVGE 
DDPFSGGPGE TMFRSMLVDQ YGRQMAQSGG IGIADAVYRE MLQMQEVQK