| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2547 |
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| Symbol | |
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| ID | 5455377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2749880 |
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| End bp | 2750671 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878124 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001413813 |
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| Protein GI | 154252989 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.776253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG ACAGTTCCAT TTCCGCGGTC GTGACCGGCG GCGCGTCGGG CCTTGGCAAG
GCGACCGTGA CGGCGCTGCG CGCGCTCGGC GCGAAGGTGG CGATCTTCGA CCTCAACCGC
GAGAACGGAG AACGGGTGGC GAAGGAGCTC GGCGCGCTTT ATTGCGAGGT CAATGTGATG
GATGAGGCAT CCGTCGATGC GGGCTTCGCG AAGGCGCGGG CGGAGAACGG GCAGGAGCGG
TGCCTCGTGA ACTGCGCCGG CGGCGGGCGC GGCGGCAAGA CGATTGCGCG CGACAAGAAG
ACGGGCGAGA TCGTTCCCTT CAAGATCGCG GATTTCGAAT ATGTGCTGGG ACTGAACACG
GTGGGCACGT TTCGCTGCAT CGTGAAAAGC GCGGCGGGAA TGGCGACGCT CGATCCGCTG
GAAGGCGGCG AGCGCGGCGC CATCGTGAAT ACGGGATCGG TCGCGGCGGA GGACGGGCAG
ATCGGGCAGG TGGCCTACTC GGCGGCGAAG GCGGCGATCA AGGGCATGAC GCTGACGATT
GCGCGCGACC TTTCACGCGA AGGCATACGC ATCAACACGA TCCTTCCCGG CATCATGGCG
ACGCCGCCGA TGCTGGGCGT GAAGGACCGC GCGCCGCAGA TTTTCGACAA TCTGGCGGCG
TCGGTGCCTT TTCCGCCAAG GCTCGGCGAT CCGTCGGAAT ATGCGGATCT GGCGCTGACG
ATGCTGAGGA ACGGGTATTT CAACGGCGAG ACGGTGCGTC TCGACGGCGC CATCAGAATG
CCGCCGCGCT GA
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| Protein sequence | MKLDSSISAV VTGGASGLGK ATVTALRALG AKVAIFDLNR ENGERVAKEL GALYCEVNVM
DEASVDAGFA KARAENGQER CLVNCAGGGR GGKTIARDKK TGEIVPFKIA DFEYVLGLNT
VGTFRCIVKS AAGMATLDPL EGGERGAIVN TGSVAAEDGQ IGQVAYSAAK AAIKGMTLTI
ARDLSREGIR INTILPGIMA TPPMLGVKDR APQIFDNLAA SVPFPPRLGD PSEYADLALT
MLRNGYFNGE TVRLDGAIRM PPR
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