| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2530 |
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| Symbol | |
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| ID | 5456288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2728618 |
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| End bp | 2730264 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878107 |
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| Product | nucleotidyltransferase/DNA polymerase |
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| Protein accession | YP_001413796 |
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| Protein GI | 154252972 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.397333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATGTT CCCTTTTTGT TCCATCCAGC TTCTCGGGTA GACGTATGGG AGGCGAACGC
AGGATTGTTG CAGTCTGGTG GCCTCACTGG GCCATCGAAC GCCTTGAGCG CGATCTCGCG
CGACGAGCGC GGCCCTTGCG GGTGCCGGAG AAGCCACGTG CTCTAGCCAT GCCGGGGGTG
GGTGGGCTCC GTGTGACCGC GCGCAACGAA CTTGCAGATG CTGCAGGGAT AAGACCGGGG
CAGATGGTCT CCGACGCCAC GGCACTTTGT CCGGGGCTAG AGCTGCATTC AGCGGATAGG
GAAGGCGATC GCAAGGGATT GGTCCGGCTG GCAGGATGGT GCGGGCGTTA CACTCCCTGG
ACGGCGCTTG ATCCTCAAGG GATCGGAGAT GAACCCGATG GCATTCTGCT GGACATCACC
GGGTGCGATC ATCTTTTCGG CGGTGAGGCG AAGCTTCTCG AAGAATTGCG GAGACGGCTT
CAGGGCTTTG GCCTGACGAC ACGAGCCGCC ATCGCATCGA CGAGGGGAGC AGCCTGGGCA
TTGGCTCGCT TCGGTAACCA GCCTGCTCTT GTTTTGCCGG TAAACGGAGA AGTCGATGCT
CTCCGTTCGC TTCCTGTAGC CGCACTTCGA TTGAATGAGG CCATCGTCAA CGGCCTCATG
CGTCTCGGGC TCAAAAAGAT CGGCGATCTC TATGGAAAGC CCCGGGCACC TGTTACGGCA
CGTTTCGGAC CGGAGGTTTC GCGCCGTCTC GATGAAGCGC TCGGATTTGA ACCGGAGCCG
ATATCGCCGG AGCTTCCGCC TGTGTTCTAT CGGGCCAGCA TTACTTTTTC CGAAGGCCTG
ACGCGAAACG CGCATATCGA AGATGCTGTA AAGCGGATCG CTGCCGATCT CTGCGAAGTG
CTTGAGCGGG AGCACCAGGG TGCGCGACGG TTGGAATTGC AGCTTTTCCG TGTCGATGGG
GAAGTGACGC GATTGCAAGC CGGAACAGGC ATTGCTTCAC ATGATGCCTT TCATCTCTCT
CGTCTTTTTC GCGAGAAACT CGCCCAACTG GGAGATGATT TTGACACGGG GTTCGGGGTG
GAAGCTCTCA CGCTTTCCTG CCTTGCCGTC GACGAACTGA AGCCTGCACA GGAAACTTTC
GAAAATGAAA GCAGTCGCGC GCAGGCGCTG GAACAATTTA TCGACAGGCT GAGCAATCGC
TTCGGGGCTG ATCGTGTTCT GCGACTGGAG CCACGTGCAA GCCATATTCC CGAACGCGCA
GCTGTCGCCG TTCCAGCCTT GCACGGCCAT ATGCCGGCCA TGCAAGGCTG GAAAACCTAT
GTGAGCGAAC AGATGGCTTC GGTTCTTGGA GGAAGCCTGC CTCGTCCTCT TCGGCTTTTG
CCGTCCCCTG AAGCCGTGGA TGTAATGGCG GAGGTGCCTG AAGGTCCCCC TCGTATTTTC
CGTTGGCGGC GCATATCCCA CCAGGTTGCC CGCGCTGAGG GACCGGAACG GCTTTCTCCG
GAATGGTGGC GAGAGGGAAA GCACCGCACG CGGGATTACT ACCGCGTGGA AGATATCGAA
GGACGGCGTT TCTGGCTTTA TCGCGATGGA CTTTACCATC GGGATAATGA AGGGCCGCGC
TGGTATCTGC ATGGAGTGTT CGAATGA
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| Protein sequence | MICSLFVPSS FSGRRMGGER RIVAVWWPHW AIERLERDLA RRARPLRVPE KPRALAMPGV
GGLRVTARNE LADAAGIRPG QMVSDATALC PGLELHSADR EGDRKGLVRL AGWCGRYTPW
TALDPQGIGD EPDGILLDIT GCDHLFGGEA KLLEELRRRL QGFGLTTRAA IASTRGAAWA
LARFGNQPAL VLPVNGEVDA LRSLPVAALR LNEAIVNGLM RLGLKKIGDL YGKPRAPVTA
RFGPEVSRRL DEALGFEPEP ISPELPPVFY RASITFSEGL TRNAHIEDAV KRIAADLCEV
LEREHQGARR LELQLFRVDG EVTRLQAGTG IASHDAFHLS RLFREKLAQL GDDFDTGFGV
EALTLSCLAV DELKPAQETF ENESSRAQAL EQFIDRLSNR FGADRVLRLE PRASHIPERA
AVAVPALHGH MPAMQGWKTY VSEQMASVLG GSLPRPLRLL PSPEAVDVMA EVPEGPPRIF
RWRRISHQVA RAEGPERLSP EWWREGKHRT RDYYRVEDIE GRRFWLYRDG LYHRDNEGPR
WYLHGVFE
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