Gene Plav_2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2511 
Symbol 
ID5454023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2712226 
End bp2712624 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID640878088 
Productcytochrome c class I 
Protein accessionYP_001413777 
Protein GI154252953 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.657545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0330621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC TGTTCCACGG ATTTGCAGCG ATTTCCCTTG CCATGACCAT TTCGGGCGCC 
GCGCTGGCCG AAGGGCCGGA CCTCGCGGAC GGCAAGAAGA TCTTCGCCCG CTGCAAGGCT
TGCCATACCC TCGAGGAAGG CGGCAAGGAC GGCATCGGCC CGAACCTTCA CGGCGTATTC
GGCCGCACCG CCGGCACCAA GGAAGGCGTG AAATTCTCCA AGGCGATGAC GGCAAAAGGC
GCCGAGGGCC TGGTCTGGTC GGAAGAGACC CTGTCGGTCT ATCTCGAAAA GCCGGCTGCC
ATGGTTCCCG GCACGAACAT GGCTTTCCCG GGCCTCAAGA AGGAAGAGGA CCGCGCCAGC
CTGATCGCCT ATCTCAAATC CGAAACCGGC GCGGAATAA
 
Protein sequence
MRDLFHGFAA ISLAMTISGA ALAEGPDLAD GKKIFARCKA CHTLEEGGKD GIGPNLHGVF 
GRTAGTKEGV KFSKAMTAKG AEGLVWSEET LSVYLEKPAA MVPGTNMAFP GLKKEEDRAS
LIAYLKSETG AE