| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2509 |
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| Symbol | |
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| ID | 5454933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2708705 |
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| End bp | 2709730 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878086 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001413775 |
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| Protein GI | 154252951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0306929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCC CCCGCCTCCT TGCCCCGAGT TCCCAGATGC GCGAAATCAC CGTCGAAGCA
GAGTCATGGC CCATCGCCGG GGCGTTCACA ATCTCTCGCG GCTCGAAGAC CGAGGCGCGG
GTGGTCGTGG TCACGGTGAC GGAAATGGGC CTGACGGGAC GCGGCGAATG CGTGCCCTAT
GCCCGCTACA ATGAAAACGA AAAGGACGTG ATCGCCGCCA TCAAGGCGCA GGTCCAGGCA
ATCGGCGAAG GCATGAGCCG CGAAGACCTG CAACGCGCCA TGCCGCGCGG CGCGGCACGC
AACGCCCTCG ACTGCGCGCT GTGGGACCTC GAGGCGAAGC TCGCCGGCAA GGAGGTTTGG
GAAATGGCGC AGCTTGGCGC CGCCCCCCGG GCCCTCACCA CGGCCTATAC GCTGAGCCTC
GGCACGGCTG CCGAAATGCA GGAAGCGGCA AAGCGCGCAT CGCACCGGCC TCTCCTGAAA
CTCAAGCTCG GCGAAGGCGG CGACGAGGAC ATTGCGCGCG TGGAAGCGGT GCGGGCGGGC
GCGCCCAACG CGGCGCTGAT CGTCGATGCC AATGAGGGCT GGAAGCCCGA ACAGGTTCTG
CCGATGGCGC ATGAACTGGC GCGGCTCGGC GTTTCGCTGA TCGAGCAGCC GGTGCCGGCG
GCGGAAGACG AGGTGCTGCG CGGCATCGAC AGCCCCGTGC CGCTCTGCGC GGATGAAAGC
GCGCATGGGC TGGAAGGCAT GAAGCGTCTT GTCGGGCTCT ATGATTTCAT CAATGTGAAG
CTCGACAAGA CCGGCGGGCT GACCGAGGCG CTTTCGGTGA TGCGCTGCGC GAAGAAGCGG
AACCTGCGCG TTATGGTCGG CTGCATGGTG GCGACCTCTC TCGCCATGGC GCCTGCCATG
CTGATCGCGC AACAGGCGGA TTATGTGGAC CTCGACGGGC CGCTGCTTCT GGCAAAGGAC
CGCGAACACG CGCTGCGCTA TGAGAGCAGC CTCGTCTATC CGCCGGAGCG GGCACTCTGG
GGGTAG
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| Protein sequence | MFRPRLLAPS SQMREITVEA ESWPIAGAFT ISRGSKTEAR VVVVTVTEMG LTGRGECVPY
ARYNENEKDV IAAIKAQVQA IGEGMSREDL QRAMPRGAAR NALDCALWDL EAKLAGKEVW
EMAQLGAAPR ALTTAYTLSL GTAAEMQEAA KRASHRPLLK LKLGEGGDED IARVEAVRAG
APNAALIVDA NEGWKPEQVL PMAHELARLG VSLIEQPVPA AEDEVLRGID SPVPLCADES
AHGLEGMKRL VGLYDFINVK LDKTGGLTEA LSVMRCAKKR NLRVMVGCMV ATSLAMAPAM
LIAQQADYVD LDGPLLLAKD REHALRYESS LVYPPERALW G
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