| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2504 |
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| Symbol | |
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| ID | 5454689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2705353 |
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| End bp | 2706210 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878081 |
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| Product | taurine dioxygenase |
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| Protein accession | YP_001413770 |
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| Protein GI | 154252946 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0070543 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAATTG AAGTCATTCC CACAGGTGCG GCGCTCGGCG CGGAGGTGCG CGGTCTCGAT
CTCTCGAAGC CCTTGAGCGC GGACGATTTC GAAGCCGTGC AGCAGGCCTG GTACGATCAC
ATCGTGCTCC TCTTCCGCGG CCAGAAAATT TCCGACGACG ATCTCATCCG CTTCTCGCAG
CATTTCGGCG AACTCGACAT CGCGCCTGCC AGCGCCACCG ACATGGCGGG CGGCCAGGAA
AAGTCGCGGC CGGAAATCTG GATCATCTCC AACGTGATCG AGAACGGAAA GCCGATCGGC
GCGCTCGGCG ACAAGGAAGC CGAGTGGCAT ACCGATATGT CCTATGTCGC GCAGCCGCCC
ATGGCGAGCG TCCTCTATTC GCTCGAAATT CCGAGCGCGG GCGGCGATAC GAGCTTTGCC
AATATGTACA AGGCGCTTGA AGAACTGCCG GCGGATCTGC GCGCCGCCAT CGAAACCCGC
ATGGTCAATC ACGATGCGAG CACGACGAGT GTCGGCGAGC TGCGCGCAGG CGCCGATGCC
GTTCTCGATG TGCGTACCGC GCCTGGCGCC AAGCACCCAG CCATCCGCAC GCATCCGGCG
ACAGGCGGCA AGGCGCTTTA TCTCGGCCGC CGCCTCAATG GATATATCGA AGGCTGTTCC
GTCGAGGAGA GCGAGAAGCT TCTCGACCGG CTCTGGGCGC ATTGCGCGAA GCCTGAATTT
TCGTGGACGC ATAAATGGGC GGTCGGCGAT CTTCTCGTCT GGGACAATCG TTCGGCGATT
CACCGCCGCG CCAGTTTCGA CGGGCGCGAG CGGCGTGTCA TGCACCGCAC CCAGATCAAG
GGCGACCGGC CGCGCTGA
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| Protein sequence | MAIEVIPTGA ALGAEVRGLD LSKPLSADDF EAVQQAWYDH IVLLFRGQKI SDDDLIRFSQ
HFGELDIAPA SATDMAGGQE KSRPEIWIIS NVIENGKPIG ALGDKEAEWH TDMSYVAQPP
MASVLYSLEI PSAGGDTSFA NMYKALEELP ADLRAAIETR MVNHDASTTS VGELRAGADA
VLDVRTAPGA KHPAIRTHPA TGGKALYLGR RLNGYIEGCS VEESEKLLDR LWAHCAKPEF
SWTHKWAVGD LLVWDNRSAI HRRASFDGRE RRVMHRTQIK GDRPR
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