| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2493 |
|---|
| Symbol | |
|---|
| ID | 5454833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2695116 |
|---|
| End bp | 2695832 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640878070 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001413759 |
|---|
| Protein GI | 154252935 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0424755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.184077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAA TCGACTTGAA CGTGCTCGGG CTTAGGGACG GCCAGCGCGC GCTCGACCTC
GGTTGCGGCG CCGGCCGGCA TGTCCATGCC ATGTATTACC ACTCGAAGTG CCATGTGGTC
GGGCTCGACC TCGGCTTCGA GGACGTGCGC CGCACACGCG ACGGCTTCGG CACCTGCCCC
GACATGGACC CGGACACAAA ACGCTCGTTC TCGCTGACGG TGGGCAACGC GCTGTCCCTG
CCCTTCCCCG ATGCGAGCTT CGACAAGATC CTGTGTTCGG AAGTGCTGGA GCATATCCCC
GACTACGAAC AGGCCGTGGC GGAGATCGAT CGCATCCTGA AGCCGGGCGG AACCCTTGCC
GTCAGCGTGC CGCGCTACTG GCCCGAGCGG GTCTGCTGGA CGCTGTCGGA CGACTATCAC
AACGAACCCG GCGGCCATGT CCGCATTTTC CGCGAAAGCC AGCTCAAGGG CTCTGTCGAG
GCGCGCGGCC TTTCCTTCTT CCATCGCCAT TTCGCGCATG GGCTTCATTC GCCATACTGG
TGGCTGAAAT GCGCCGTGGG CGTGAAGCGC GAGGACGTTA AGATCGTCAA TCTCTACAAA
CGCTTTCTTG AATGGGACAT CCTGCAAGGC CCGTGGCTGA CCCGCGCGCT GGAGAAGATC
GCCGGCCCGC TGATGGGCAA GAGCGTCGTC CTCTATTTCA CCAAGGGAGC GGCGTAG
|
|---|
| Protein sequence | MQTIDLNVLG LRDGQRALDL GCGAGRHVHA MYYHSKCHVV GLDLGFEDVR RTRDGFGTCP
DMDPDTKRSF SLTVGNALSL PFPDASFDKI LCSEVLEHIP DYEQAVAEID RILKPGGTLA
VSVPRYWPER VCWTLSDDYH NEPGGHVRIF RESQLKGSVE ARGLSFFHRH FAHGLHSPYW
WLKCAVGVKR EDVKIVNLYK RFLEWDILQG PWLTRALEKI AGPLMGKSVV LYFTKGAA
|
|---|
| |