| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2483 |
|---|
| Symbol | |
|---|
| ID | 5454657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2684825 |
|---|
| End bp | 2685973 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640878059 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_001413749 |
|---|
| Protein GI | 154252925 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.113844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGATT TGCGCCGCCT GACAGGGCAA GAGTTGCGGC TCAGCGAAAA GCTGGTCGAA
TTCAACTGGG GCTTCCTGCT TCTTCTCGCG CTGATCGCGT CGATCGGCTT TGCGATGCTT
TATTCGGTGG CCGATGGCAG CTTCACGCCC TGGGCCTTGC GTCAGGCGGC GCGTTTCGCC
GCGGGCGCCT GCATCATGAT CGTCGTCGCA ATGATCGATT TGCGGCTTTG GATGAGGCTG
GCCTATCCGC TTTACGGAAT GTCGCTGGCT CTGCTGATCG CGGTTGAAAT CATGGGCTTT
ACGGGCATGG GCGCGCAGCG CTGGCTCGAT CTCGGCATCA TTCAGCTGCA GCCTTCGGAG
ATCATGAAGG TGACGCTGGT GCTGGTGCTG GCGCGTTATT TTCACGGGCT GACGCTAGAT
GAGGTTTCGC GTATCAGAAA TCTCTTGATC CCGCTGGCTC TGGTCGGAGC TCCCGTTGCG
CTTGTCGTTC TGCAGCCCGA CCTGGGAACA GCTATCCTTT TGGTCGCCGC CGGAGCCATT
ATCTTCTTCT CTGCGGGGCT GCGCTGGCGG TATTTCATTT TTGCCGGCGC GGGTGTCCTG
GCAGCGATCC CCGTCATCTG GAGCCGGCTG CACGACTATC AGCGCAATCG CGTCTTCACG
TTTCTCGACC CCGAAAGCGA TCCGCTCGGC ACCGGCTACC ACATCCTGCA ATCGAAGATC
GCTCTCGGCT CGGGCGGCAT TTTCGGCAAG GGATTTATGG AAGGCACGCA GAGCCAGCTG
AATTTCCTGC CGGAAAAGCA TACCGACTTC ATTTTCACGA TGCTGGGCGA GGAGCTCGGC
CTGGTGGGCG GGCTGGCGCT CCTCACTCTT TATTTCATCG TGCTGATGTT CTCCTTCAAT
GTCGCGCTCC AGTGCCGCAA CCAGTTCGGC CGCCTTCTCG CGATCGGCAT TTCGATGATG
TTTTTCTTCT ATGTTTTCAT CAATACGGCG ATGGTGATGG GGCTTCTGCC GGTTGTGGGC
GTGCCGCTCC CGCTCGTCTC TTATGGCGGC ACGTCGATGC TGTCGCTGAT GTTCGCCTTC
GGGCTTTTGA TGAGCGTCTA TATCCACAGG AATCTGGAAA TTTCCAGGGG CCCCAGCGCC
TTCTGGTGA
|
|---|
| Protein sequence | MLDLRRLTGQ ELRLSEKLVE FNWGFLLLLA LIASIGFAML YSVADGSFTP WALRQAARFA
AGACIMIVVA MIDLRLWMRL AYPLYGMSLA LLIAVEIMGF TGMGAQRWLD LGIIQLQPSE
IMKVTLVLVL ARYFHGLTLD EVSRIRNLLI PLALVGAPVA LVVLQPDLGT AILLVAAGAI
IFFSAGLRWR YFIFAGAGVL AAIPVIWSRL HDYQRNRVFT FLDPESDPLG TGYHILQSKI
ALGSGGIFGK GFMEGTQSQL NFLPEKHTDF IFTMLGEELG LVGGLALLTL YFIVLMFSFN
VALQCRNQFG RLLAIGISMM FFFYVFINTA MVMGLLPVVG VPLPLVSYGG TSMLSLMFAF
GLLMSVYIHR NLEISRGPSA FW
|
|---|
| |