Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2477 |
Symbol | |
ID | 5456058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2677725 |
End bp | 2678729 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878053 |
Product | CaCA family Na(+)/Ca(+) antiporter |
Protein accession | YP_001413743 |
Protein GI | 154252919 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0530] Ca2+/Na+ antiporter |
TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0302192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.536733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCCATG TTGGCTTGCC CGTGTCGGGG CGCCGGTTCA GGGAGCAAGA ATTGACCTAT CTCTTTCTCG TCGTCGGCCT TGTGCTGCTT CTCGGTGGGG CGGAGTTTCT GGTCAAGGGC GCAGCGTCGC TCGCGACCCG GCTCGGGGTT TCGCCTTTTC TCATCGGGCT CACGCTTGTC GGCTTCGGCA CGTCCGCGCC GGAGCTTGTC GCCAGCCTTG AAGGCGCCTT TCAGGGCTAT CCGGGCATCG CGGTCGGCAA TGTCGTCGGC TCCAACATTG CCAACATCCT CCTCATTCTC GGCATTGCCG GTCTCATCTT TCCGATGACG GTGGATCGCG GTGCGTTGAA GCGGGATGGC AGCATGATGC TCGGGGCTGC CGCCATCATG ATGGGCGCCT GCCTTTATGG CGTGCTGTCG CGCGAAGTCG GATTGGGCTT CCTCGCGCTT CTCTCTGTCT ATCTCATCTA TACCTACCGC GCCGACCGCA GGCTCCAGGA TGGCACCGCG AAGCTTCATG CCGGCGAGGC GGAGTTCCTG ACCTCGACGG GACCCAAAAC CTCTCTGCTC GTTGAGATCG TCATGGCGCT GGGCGGGCTC GTCGCGCTTG TCACCGGCGC CTCGCTGCTC GTGGATGCGG CCGTCGAGAT CGCGACCAGG CACGGCGTCT CCGATTCGGT CATCGGCCTC ACCCTCGTTG CCGTCGGCAC CTCCTTGCCG GAGGTGGCGA CCTCGGTGCT CGCCGCCTTC CGCCGTCAGT CGGACATCGC CATCGGCAAT GTCGTCGGCT CCAACATCTT CAACGTGCTC GGTATCGCCG GCATGGTCGC CGTGGTGAAG CCGGTTCCGG TGCCGGCCGA CATCGCCGGC TTCGACATCT GGGTCATGGG TGCCGCGTCG CTCCTGTTTC TGGTTTTCGC CTGGACCGGG TCGCGGATCG GGCGGGTGGA GGCGCTTTTG CTGCTGGGCG GCTACGGGGC TTATGTGACG GTTTTATTGC AGTAA
|
Protein sequence | MRHVGLPVSG RRFREQELTY LFLVVGLVLL LGGAEFLVKG AASLATRLGV SPFLIGLTLV GFGTSAPELV ASLEGAFQGY PGIAVGNVVG SNIANILLIL GIAGLIFPMT VDRGALKRDG SMMLGAAAIM MGACLYGVLS REVGLGFLAL LSVYLIYTYR ADRRLQDGTA KLHAGEAEFL TSTGPKTSLL VEIVMALGGL VALVTGASLL VDAAVEIATR HGVSDSVIGL TLVAVGTSLP EVATSVLAAF RRQSDIAIGN VVGSNIFNVL GIAGMVAVVK PVPVPADIAG FDIWVMGAAS LLFLVFAWTG SRIGRVEALL LLGGYGAYVT VLLQ
|
| |