Gene Plav_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2477 
Symbol 
ID5456058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2677725 
End bp2678729 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID640878053 
ProductCaCA family Na(+)/Ca(+) antiporter 
Protein accessionYP_001413743 
Protein GI154252919 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0302192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.536733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCATG TTGGCTTGCC CGTGTCGGGG CGCCGGTTCA GGGAGCAAGA ATTGACCTAT 
CTCTTTCTCG TCGTCGGCCT TGTGCTGCTT CTCGGTGGGG CGGAGTTTCT GGTCAAGGGC
GCAGCGTCGC TCGCGACCCG GCTCGGGGTT TCGCCTTTTC TCATCGGGCT CACGCTTGTC
GGCTTCGGCA CGTCCGCGCC GGAGCTTGTC GCCAGCCTTG AAGGCGCCTT TCAGGGCTAT
CCGGGCATCG CGGTCGGCAA TGTCGTCGGC TCCAACATTG CCAACATCCT CCTCATTCTC
GGCATTGCCG GTCTCATCTT TCCGATGACG GTGGATCGCG GTGCGTTGAA GCGGGATGGC
AGCATGATGC TCGGGGCTGC CGCCATCATG ATGGGCGCCT GCCTTTATGG CGTGCTGTCG
CGCGAAGTCG GATTGGGCTT CCTCGCGCTT CTCTCTGTCT ATCTCATCTA TACCTACCGC
GCCGACCGCA GGCTCCAGGA TGGCACCGCG AAGCTTCATG CCGGCGAGGC GGAGTTCCTG
ACCTCGACGG GACCCAAAAC CTCTCTGCTC GTTGAGATCG TCATGGCGCT GGGCGGGCTC
GTCGCGCTTG TCACCGGCGC CTCGCTGCTC GTGGATGCGG CCGTCGAGAT CGCGACCAGG
CACGGCGTCT CCGATTCGGT CATCGGCCTC ACCCTCGTTG CCGTCGGCAC CTCCTTGCCG
GAGGTGGCGA CCTCGGTGCT CGCCGCCTTC CGCCGTCAGT CGGACATCGC CATCGGCAAT
GTCGTCGGCT CCAACATCTT CAACGTGCTC GGTATCGCCG GCATGGTCGC CGTGGTGAAG
CCGGTTCCGG TGCCGGCCGA CATCGCCGGC TTCGACATCT GGGTCATGGG TGCCGCGTCG
CTCCTGTTTC TGGTTTTCGC CTGGACCGGG TCGCGGATCG GGCGGGTGGA GGCGCTTTTG
CTGCTGGGCG GCTACGGGGC TTATGTGACG GTTTTATTGC AGTAA
 
Protein sequence
MRHVGLPVSG RRFREQELTY LFLVVGLVLL LGGAEFLVKG AASLATRLGV SPFLIGLTLV 
GFGTSAPELV ASLEGAFQGY PGIAVGNVVG SNIANILLIL GIAGLIFPMT VDRGALKRDG
SMMLGAAAIM MGACLYGVLS REVGLGFLAL LSVYLIYTYR ADRRLQDGTA KLHAGEAEFL
TSTGPKTSLL VEIVMALGGL VALVTGASLL VDAAVEIATR HGVSDSVIGL TLVAVGTSLP
EVATSVLAAF RRQSDIAIGN VVGSNIFNVL GIAGMVAVVK PVPVPADIAG FDIWVMGAAS
LLFLVFAWTG SRIGRVEALL LLGGYGAYVT VLLQ