Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2475 |
Symbol | |
ID | 5454929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2676508 |
End bp | 2677266 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640878051 |
Product | helix-turn-helix type 11 domain-containing protein |
Protein accession | YP_001413741 |
Protein GI | 154252917 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0100218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.326712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGAA CAAGTCGGCT ATTCGAGCTG CTCGGCGTGT TACGCGCACG CAGGATGCCT GTTACAGCCC CCGATCTCGC GCGCGAACTT GGTGTCTCGC CGCGGAGTAT ATACCGCGAC ATCGACACAT TGCGTTCGCT AGGGGCGCCT ATCGAAGGCC AGGCGGGTGT CGGCTATTCT TTGAAAGAAG GCTTTTTTCT TCCGGATCTC GCATTTTCGC CCGATGAACT CGACGCGTTG ACTCTCGGTC TGGGCTGGGT GCGGCAGCGA GCCGATCCTG CTCTGGCACG ATGCAGCGAA AGCGCCCTGG CAAAAATATT TTCCGCGAAA AATAACGGCT CAATGAGCGC CCAATTACCT GCTGTCGTAA CGGCGGCCTC GACGTCTGAG CCTGCGGTCC CTCCGCAGGC CGCATTGTTG CGGGATGCGA TCCGCCGGCA ACGGAAAGTT GCGATCAGCT ATGAAGACGC GCAAGGCTCG TTGTCGGATC GTGTCATCTG GCCGATCACC ATCGTCTATT TCGACGATGT CCGTGTGCTG GCGGCCTGGT GCGAACGCAG ACATGCCTTC CGTCATTTCC GCATCGATCG TTTGCGTGTG AAAACGATTT TGGAGGAACG CTACCCCGGG AGACGTCAAT CGATCGTGAC GCAGTGGCGG CAGCAGGATC GCGACTGGCG TTCCATGCTG ACAATTTCTG ACACGCCGAA ACGCTACCAA TCGGCGGGTG CCCTTACCGG TGCCATGTCA AAGGAATGA
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Protein sequence | MSRTSRLFEL LGVLRARRMP VTAPDLAREL GVSPRSIYRD IDTLRSLGAP IEGQAGVGYS LKEGFFLPDL AFSPDELDAL TLGLGWVRQR ADPALARCSE SALAKIFSAK NNGSMSAQLP AVVTAASTSE PAVPPQAALL RDAIRRQRKV AISYEDAQGS LSDRVIWPIT IVYFDDVRVL AAWCERRHAF RHFRIDRLRV KTILEERYPG RRQSIVTQWR QQDRDWRSML TISDTPKRYQ SAGALTGAMS KE
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