| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2474 |
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| Symbol | |
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| ID | 5453714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2675196 |
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| End bp | 2676401 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878050 |
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| Product | phosphoribosylglycinamide formyltransferase 2 |
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| Protein accession | YP_001413740 |
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| Protein GI | 154252916 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
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| TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00530276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.239211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG GCACACCGCT TTCTCCTTCC GCGTTCCGCG TCATGCTTCT CGGCTCGGGC
GAGCTCGGCA AGGAAGTCGC GATCGAGCTT CAGCGGCTCG GCGCCGAGGT GATCGCCGTC
GATCGCTACG AGAACGCGCC CGCGCAGCAG GTCGCGCATC GCAGCCATGT CATCGCCATG
ACGGATGCCG GGGCGCTTCG CGCGCTTGTC GAAAAGGAGC GTCCGCATCT CATCGTGCCG
GAAATCGAGG CAATAGCGAC GGATGAACTG GCGCGCATCG AAGCGGACGG TCTCGCCGAA
GTGATTCCGA CCGCGCGCGC CGCCCAGCTC ACCATGAACC GCGAGGGCAT TCGCCGTCTC
GCGGCGGAGG AACTCGGGCT TCCCGTCTCG CCCTATGCCT TCGCCTCCAC CGCGCAGGAG
CTGAAGGATG CAATAGCGGC GGGTATCGGA TTTCCCTGCT TCGTCAAGCC GGTGATGTCG
TCTTCCGGCA AGGGGCAGAG CCTGCTTCGC GGGCCGGACG ATGTTCAGCC CGCCTGGGAT
TATGCGATGG CAGGCGGCCG CGTCGAGAGC CCGCGCGTCA TCGTCGAGGG GCTGATCGAC
TTCGATTACG AGATCACGCA GCTCACGGTT CGTGCGCGCG GGCAGGGCGG CGAGATCGAA
ACGCAGTTCT GCGCCCCGGT CGGCCATCGT CAGGTCAAGG GCGATTATGT CGAAAGCTGG
CAGCCGCAGA AAATGAGCGA CAAGGCGCTC GCCGCCTCGC GCGACATCGC GGCGAAGGTT
ACGGCGGCGC TGGGCGGACG CGGGATTTTC GGCGTCGAGC TTTTCGTGAA GGGCGACATG
GTCTGGTTTT CCGAAGTGAG CCCGCGTCCG CACGACACCG GCCTCGTCAC GCTTATCACG
CAATATCAGA GCGAGTTCGC GCTTCATGCG CGCGCCATTC TCGGCCTTCC CGTCACCGTG
GACATGATTT CGCCCGGTGC CAGCGCCGTC ATTTATGGCG GGCTCGAAGA AAAGGGCATC
GCCTTCGAGG GCGTCGAGGC GGCGCTCGCG CTGCCCGGCA CCGACATCCG GCTTTTCGGC
AAGCCGGAAT CCTTCGAGCG CCGCCGCATG GGCGTCGCGC TTGCCCGCGC CGGAGATACC
GACGAGGCAC GCAAGGTCGC GAAGCAGGCG GCGGATGCCG TCCGACCCGT CTCCGGGACA
AAATAA
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| Protein sequence | MRIGTPLSPS AFRVMLLGSG ELGKEVAIEL QRLGAEVIAV DRYENAPAQQ VAHRSHVIAM
TDAGALRALV EKERPHLIVP EIEAIATDEL ARIEADGLAE VIPTARAAQL TMNREGIRRL
AAEELGLPVS PYAFASTAQE LKDAIAAGIG FPCFVKPVMS SSGKGQSLLR GPDDVQPAWD
YAMAGGRVES PRVIVEGLID FDYEITQLTV RARGQGGEIE TQFCAPVGHR QVKGDYVESW
QPQKMSDKAL AASRDIAAKV TAALGGRGIF GVELFVKGDM VWFSEVSPRP HDTGLVTLIT
QYQSEFALHA RAILGLPVTV DMISPGASAV IYGGLEEKGI AFEGVEAALA LPGTDIRLFG
KPESFERRRM GVALARAGDT DEARKVAKQA ADAVRPVSGT K
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