Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2469 |
Symbol | |
ID | 5454474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2671694 |
End bp | 2672440 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878045 |
Product | hypothetical protein |
Protein accession | YP_001413735 |
Protein GI | 154252911 |
COG category | [R] General function prediction only |
COG ID | [COG1647] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.505624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.536733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTATT CCATCGATCA CTGGGGCGAC TATCGAAACG ATGACGACGA AATGACCGAA CCAGGCTGGC TGTCGCGCCT CGGCGAACTG CGCATCTTCG CGGAACTCGG AACGCTGGTG CCGGCCCTTC CGGCGCTGCT GGCGGCGCCG CGCGGCGACG GGCACGCCGT GCTCGTGCTG CCCGGCGTGC TGACCGGCGA CGAGAGCACC TTCATCATCC GCCGCTATCT CGACGAACTC GGCTATGTGA CGCATCCCTG GAAGCAGGGC CACAATTGGG GGCCGAGCCG GGAGCTGCAT GAGCGGCTGC GGGCCCGGCT GCAGGAACTG GCCGCGCGCT ACGAACGGCG CATCAGCATT GTCGGCTGGA GCCTTGGCGG CATTTTCGCG CGCGAACTGG CGCGGGAATT TCCCGCGCTT GTGCGCCAGG TGGTGACGCT TGGCAGCCCC TTCGGCTCGG ACTACAGCAT CGACGGCAAC CGCAGGCCCG ACGCCGCCGC GCGCCGCCGC ATTCCCCCGC CCGTGCCCTG CACCTCGATC TATTCGCGGA GCGACGGCAT CGTCTCATGG GAAGCCTGCC GCGAAATGGA TGCTCCGGAG ACGGAGAATA TAGAAGTCTC GGCCACCCAT ATCGGCATGG GCTTCAACCC GCTGGTTCTC TGGGCCATCG CCGACCGGCT GGCACAGCCC GAAGGCGAAT GGTCGCCCTT CGACCGGACG GGATTTCACA GCGTTTTTTA CGGGTAG
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Protein sequence | MTYSIDHWGD YRNDDDEMTE PGWLSRLGEL RIFAELGTLV PALPALLAAP RGDGHAVLVL PGVLTGDEST FIIRRYLDEL GYVTHPWKQG HNWGPSRELH ERLRARLQEL AARYERRISI VGWSLGGIFA RELAREFPAL VRQVVTLGSP FGSDYSIDGN RRPDAAARRR IPPPVPCTSI YSRSDGIVSW EACREMDAPE TENIEVSATH IGMGFNPLVL WAIADRLAQP EGEWSPFDRT GFHSVFYG
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