Gene Plav_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2465 
Symbol 
ID5456226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2668545 
End bp2669057 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID640878041 
Productacetolactate synthase, small subunit 
Protein accessionYP_001413731 
Protein GI154252907 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.463882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.328316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTG AGGAAAAAGT CGAGCGGCAC ACCATCGCCG TCCTCGTGGA CAACGAGGCG 
GGCGTGCTCG CGCGCGTCGT CGGCCTGTTT TCCGGCCGCG GCTACAATAT CGAGAGCCTG
ACGGTGGGCG AGGTCGACCA GGCCGAGCAC ACGTCCCGCA TCACCGTCGT CACCGCTGGC
ACGCCGATGG TGATCGAGCA GATCAAGGCG CAGCTCGACC GTCTCGTGCC CGTGCACCGG
GTCATGGACC TGACGGTGGA AACGAATTCG GTGGAGCGCG AAATGGCGCT CATCAAGGTG
GCGGGAACCG GCGAGCGCCG CGTCGAGGCG CTCCGGCTCG CGGATGCCTT CCGCGCCCGC
GTCATCGATA CGACGCATAC GTCGTTTGTG TTCGAAGTGA CGGGTACGCC GTCGAAGATC
GACGCCTTTA TCGGGCTGAT GCGCCCCTTG GGGCTGGTGG ATGTGTCGCG GACAGGCGTG
GTGGCAATCG CCCGCGGTCC GGAAGCGATG TGA
 
Protein sequence
MSIEEKVERH TIAVLVDNEA GVLARVVGLF SGRGYNIESL TVGEVDQAEH TSRITVVTAG 
TPMVIEQIKA QLDRLVPVHR VMDLTVETNS VEREMALIKV AGTGERRVEA LRLADAFRAR
VIDTTHTSFV FEVTGTPSKI DAFIGLMRPL GLVDVSRTGV VAIARGPEAM