| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2463 |
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| Symbol | |
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| ID | 5455289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2665660 |
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| End bp | 2666604 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878039 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001413729 |
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| Protein GI | 154252905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.179525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGAGC CTGTCGGCAG AGCCGTCCTT ATTGCAGGGC CAACCGCCAG CGGCAAGTCG
GGGCTGGCGC TTGCGCTTGC CGAAAAGCTC GGCGGCGAGA TCGTCAATGC CGATTCCATG
CAGCTTTACC GCGAGATGCG GGTGCTCACC GCCCGCCCTT CGGAAGAGGA AGAGGCGCGG
GTTCCCCATC ATCTCTATGG CGTGACGGCG GCCTCGGCGC CGCTCTCGGC GGGGCGCTGG
GCGGTTCTGG CGGCGGAGAA AATGCGCGAG ATCGCGGCGC GCGGCCGGCT TCCGGTCGTG
GTGGGCGGCA CTGGTCTTTA TTTTCGTGCG CTCATCGAAG GTCTCGCGCC CATTCCGGCC
ATCCCCGACG ATGTTCGCGC CGCCGTGCGC GCCGAGGTGG GCGATGCCGG GCCTCATGCC
CATGCGCTCC TTGCCGAGGC CGATCCGGCG CTGGCTGCCA CAATCCGCCC TTCCGATCTT
CAGCGCATCG CGCGGGGGAT AGAGGTTGCC CGCGCGACCG GCCGTCCCTT GAGCGCCTGG
CAGCAGATAC CGCCGGAGCC GTTGGTGAGC GGGACGTTCG CGAAAATCAT GCTGATGCCG
GACCGTGCCT GGCTGCAGGC CCGGTGCGAT CGGCGCTTCG ATCTCATGCT TGAGGAGGGG
GCGCTGGAGG AGGCGGCGGC GATGACCGCC CTAGGGCTCG ATCCGGCGCT CCCCGCCGCC
AAGGCCCTTG GCCTGCGGCC CCTGATGCGG CATCTCGCCG GGGAGATCAC GCTGGAAGAG
GCGGCTGCGG CCGGAAAAGC CGAAACGCGG GCCTATGCGA AGCGGCAGGA AACCTGGCTT
CGTACGCAAA TGATTGCGTG GAAAGGCTTC TCCACGCAAC ATTCGGAAAG CCTTAATGCT
GAAATCTTGT CATTTATTGA CGATTTAGGG TTGACCCGGT CCTGA
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| Protein sequence | MSEPVGRAVL IAGPTASGKS GLALALAEKL GGEIVNADSM QLYREMRVLT ARPSEEEEAR
VPHHLYGVTA ASAPLSAGRW AVLAAEKMRE IAARGRLPVV VGGTGLYFRA LIEGLAPIPA
IPDDVRAAVR AEVGDAGPHA HALLAEADPA LAATIRPSDL QRIARGIEVA RATGRPLSAW
QQIPPEPLVS GTFAKIMLMP DRAWLQARCD RRFDLMLEEG ALEEAAAMTA LGLDPALPAA
KALGLRPLMR HLAGEITLEE AAAAGKAETR AYAKRQETWL RTQMIAWKGF STQHSESLNA
EILSFIDDLG LTRS
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