| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2454 |
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| Symbol | |
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| ID | 5455671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2657317 |
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| End bp | 2658234 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878030 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_001413720 |
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| Protein GI | 154252896 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0662478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGA TGAAACTCAT TGCCGATGGC CTGAAGTTTC CGGAAGGCCC GATCGCAATG
CCGGATGGAA GCGTCGTTCT CGTCGAGATC GCGCGCGGCA CGCTGACGCG CGTCACGGCG
GCGGGAAAAG TCGAAGTGAT CGCGGAGCTT GGCGGCGGCC CGAACGGCGC GGCTATCGGG
CCCGACGGTG CCTGCTATGT CTGCAATGAT GGCGGCTTCG AATTCCATGA GGTCAACGGC
GCGCTTGTGC CGGGCGATGC TCCGGCGGAT TATTCGGGCG GCCGCATCGA GCGTGTCGAT
CTCAAGACCG GCGAATTCAA GGTGCTCTAC AAGGAGTGCA ACGGCATTCC GCTGAACGGG
CCGAACGACA TCGTCTTCGA CAAGTCGGGC GGCTTCTGGT TCACCGATCT TGGCAAGGGG
CGCGGCCGCA CGCAGGATCG TGGCGGGCTC TACTACGCAA AGATCGACGG CTCGTTCATC
AAGGAAGTCG TGTTTCCCAT CACCTCGCCG AACGGCGTCG GCCTCTCGCC CGACGAAAAG
ACGGTTTATG TCGCCGACAC GATCCCCGGC CGTCTCTGGG CCTTCGACAT TACGGCGCCG
GGTGAAGTTG CGCCCAATCC CGGCCCGCTG CCCGGCCGCT TTGTCGGTTC CGGCCCGCAG
CTCTGCTTCT TCGACAGCCT TGCAGTCGAT GCGGAAGGCA ATATCTGCGT CGCGACGATC
TTCAACGCCG GCATCACGAC CTTCTCACCT GACGGTTCGA AGATTACCCA TACGCCGACG
GATGATTTCA TCACCACAAA TATCTGTTTC GGCGGCAAGG ATCTGAAGAC GGCCTATATC
ACGCTTTCTT CCAGCGGACG GCTTGTCTCC ACGGACTGGC CGGTGGCGGG GTTGCCTCTC
AACTTCCTCA ACAAATGA
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| Protein sequence | MAEMKLIADG LKFPEGPIAM PDGSVVLVEI ARGTLTRVTA AGKVEVIAEL GGGPNGAAIG
PDGACYVCND GGFEFHEVNG ALVPGDAPAD YSGGRIERVD LKTGEFKVLY KECNGIPLNG
PNDIVFDKSG GFWFTDLGKG RGRTQDRGGL YYAKIDGSFI KEVVFPITSP NGVGLSPDEK
TVYVADTIPG RLWAFDITAP GEVAPNPGPL PGRFVGSGPQ LCFFDSLAVD AEGNICVATI
FNAGITTFSP DGSKITHTPT DDFITTNICF GGKDLKTAYI TLSSSGRLVS TDWPVAGLPL
NFLNK
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