Gene Plav_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2446 
Symbol 
ID5456944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2649357 
End bp2649839 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID640878022 
Producthypothetical protein 
Protein accessionYP_001413712 
Protein GI154252888 
COG category[S] Function unknown 
COG ID[COG3814] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.357149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGAAG ACCAGATGCG ATACGACATG CTGGCGCAGG ACGCCCTCCG GGGCGTGGTG 
CGCCGCGCGC TCAAGATCGC ACGCGACGAA GGGCTGCCGG GCGAACATCA TTTCTACATC
TCGTTCCGCA CCGACGCACC GGGCGTCGAG GTTTCGGAAA AGCTGCGCAA GCAATATCCC
GAAGAAATCA CGATCGTGCT CCAGCACCAG TTCTGGAATC TCGAAGTGAA CGAGGAACGT
TTCTCCGTCG ACCTCACCTT CAACAAGATT CCCGAACGTC TCGTGGTGCC CTTCGCCGCC
GTTCAGGGCT TCTTCGACCC GAGCGTACAG TTCGGCCTGC AGTTCCAGGT ACAAGGCGTA
AGCGCCGGCA CCAATGTCGC AAAGGACAAC GCAACCGGCG GCGTCACCGA GGCCTCGAAG
CCGGAAGAAC CGGCGCCCGC GGCCGGCGAC GTGGTGAGCC TCGACGCCTT CCGCAAGAAA
TAG
 
Protein sequence
MAEDQMRYDM LAQDALRGVV RRALKIARDE GLPGEHHFYI SFRTDAPGVE VSEKLRKQYP 
EEITIVLQHQ FWNLEVNEER FSVDLTFNKI PERLVVPFAA VQGFFDPSVQ FGLQFQVQGV
SAGTNVAKDN ATGGVTEASK PEEPAPAAGD VVSLDAFRKK