| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2440 |
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| Symbol | |
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| ID | 5454340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2642136 |
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| End bp | 2642933 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878016 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001413706 |
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| Protein GI | 154252882 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.41732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCC ATTCCCTCCT GTTCGCGAGC GCGGCCGCGC TCTTCCTCAT CGCCTGCGAC
GAGCAGCCGA AGGACACATG GCAAGGCTAT GCTGAAGGCG AGTATGTGCG CGTCGCCCCG
ATCGACGGCG GCACGATCGA AACAATCGAG GTGAAGCGCG GCGACCGCGT GAAAACGGGC
GCGCTCCTCT TCCGGCTCGA AGCGAAATCG GAAAAAGCCG CGCGCAACGC CGCCGCTGCC
AATCTCGCCG AGGCGAAGGC AACGCTTCAG GAAGCGCAAC TGGACCTTCA GCGTAAAATG
GAATTGCGCA AACAGCGCAA CGTCGCGCAA GCAGAACTCG ACACGGCACG CGCGCGGCGC
GACCGCGCAG GCGCGGCGAC ACTTGCCACG GCTTCGGCGC TCGACCAGGC GGAATGGCGC
TTGAAGCGGC GCGAAGGCCA TGCACCCACG GATGCGCTGG TACAGGACGT CTTGTTTCGC
GCGGGCGAGT TCGCGGCGGC AAGCCAACCC GTCGTCTCGC TGCTGCCGCC GCAAAACATC
AAGGTACGCT TCTTCGTGCC CGAAGCGGAG CTTGGCCGCA TACGTGAAGG CGGCACGGTG
CTGTTCTCAT GCAGCAGTTG CCCGGAAAAT TTCGCGGGCA CCATCCGTTT CGTTTCCACG
GACGCGGGAT TCGCCCCGCC CGTCATCCAT AGCGACCGCT CGAAGGAAGA ACTCTTCTAC
ATGGCGGAGG CGACGCCGGA CGAAACGCCT GAAGCTCTGC ATCCGGGACA GCCTGTAACG
GTAATGCTGC GCGAGTAA
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| Protein sequence | MRLHSLLFAS AAALFLIACD EQPKDTWQGY AEGEYVRVAP IDGGTIETIE VKRGDRVKTG
ALLFRLEAKS EKAARNAAAA NLAEAKATLQ EAQLDLQRKM ELRKQRNVAQ AELDTARARR
DRAGAATLAT ASALDQAEWR LKRREGHAPT DALVQDVLFR AGEFAAASQP VVSLLPPQNI
KVRFFVPEAE LGRIREGGTV LFSCSSCPEN FAGTIRFVST DAGFAPPVIH SDRSKEELFY
MAEATPDETP EALHPGQPVT VMLRE
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